RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	POLQ	O75417	2590 aa		6.22	□□□□□ -1.41
ATXN3-223	ENST00000553686	EVPL	Q92817	2033 aa		6.21	□□□□□ -1.41
ATXN3-223	ENST00000553686	PLXNB3	Q9ULL4	1909 aa		6.21	□□□□□ -1.41
ATXN3-223	ENST00000553686	TRAV19	A0A0A6YYK7	116 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	CCDC78	A2IDD5	438 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	MARCH11	A6NNE9	402 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686		M0QZQ0	153 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	SH2B2	O14492	632 aa	Predicted RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	SOAT2	O75908	522 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	SPDEF	O95238	335 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	CSH1	P0DML2	217 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	CSH2	P0DML3	217 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	KCNE1	P15382	129 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	OXTR	P30559	389 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	HSPA4	P34932	840 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	PDE6C	P51160	858 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	CLDN6	P56747	220 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	E2F1	Q01094	437 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	BNC1	Q01954	994 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	DMP1	Q13316	513 aa	Predicted RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	KIF19	Q2TAC6	998 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	C3orf36	Q3SXR2	165 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	XKR4	Q5GH76	650 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	DCAF12L1	Q5VU92	463 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	ARMC6	Q6NXE6	501 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	FOXR2	Q6PJQ5	311 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	ALKAL1	Q6UXT8	129 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	DSTYK	Q6XUX3	929 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	MICU3	Q86XE3	530 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	MB21D2	Q8IYB1	491 aa	Predicted RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	DCBLD1	Q8N8Z6	715 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	GPR150	Q8NGU9	434 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	SPATA20	Q8TB22	786 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	TBC1D15	Q8TC07	691 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	C2orf15	Q8WU43	125 aa	Known RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	FAM20A	Q96MK3	541 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	SMAD5	Q99717	465 aa	Known RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	LXN	Q9BS40	222 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	GPR174	Q9BXC1	333 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	ALOXE3	Q9BYJ1	711 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	ASPSCR1	Q9BZE9	553 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	TRPC7	Q9HCX4	862 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	WSB2	Q9NYS7	404 aa	Predicted RBP	6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	ANKRD6	Q9Y2G4	727 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	PHLPP2	Q6ZVD8	1323 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	WDR81	Q562E7	1941 aa		6.21	□□□□□ -1.42
ATXN3-223	ENST00000553686	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CYP3A7-CYP3A51P	A0A087WV96	503 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PIPSL	A2A3N6	862 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	GRID2IP	A4D2P6	1211 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ANKRD62	A6NC57	917 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ANTXRL	A6NF34	631 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PAPSS1	O43252	624 aa	Predicted RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	SGTA	O43765	313 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PPFIA2	O75334	1257 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CDKL5	O76039	1030 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	RHOBTB3	O94955	611 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	LARGE1	O95461	756 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	GPANK1	O95872	356 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ITGB6	P18564	788 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	TYMP	P19971	482 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PAX3	P23760	479 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CYP3A7	P24462	503 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	NMT1	P30419	496 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ACADVL	P49748	655 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ASIC1	P78348	528 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	HSD11B2	P80365	405 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	OCA2	Q04671	838 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PPP2R5C	Q13362	524 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PFKFB3	Q16875	520 aa	Predicted RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ARL13B	Q3SXY8	428 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CRB2	Q5IJ48	1285 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	TMEM150A	Q86TG1	271 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	RAB11FIP4	Q86YS3	637 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	TPH2	Q8IWU9	490 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CHPF	Q8IZ52	775 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	FSIP1	Q8NA03	581 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	NSUN7	Q8NE18	718 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	IFI44	Q8TCB0	444 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	SPPL2B	Q8TCT7	592 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	IPO4	Q8TEX9	1081 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	RFFL	Q8WZ73	363 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	KAT5	Q92993	513 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	SKA1	Q96BD8	255 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CLPTM1L	Q96KA5	538 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	CYP2S1	Q96SQ9	504 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	NUP58	Q9BVL2	599 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	POLR3F	Q9H1D9	316 aa	Predicted RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	RPF1	Q9H9Y2	349 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	ANKEF1	Q9NU02	776 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	MAGED2	Q9UNF1	606 aa	Predicted RBP	6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686	PCDHB1	Q9Y5F3	818 aa		6.2	□□□□□ -1.42
ATXN3-223	ENST00000553686		A0A1W2PQF6	199 aa		6.19	□□□□□ -1.42
ATXN3-223	ENST00000553686	CDHR4	A6H8M9	788 aa		6.19	□□□□□ -1.42
ATXN3-223	ENST00000553686	YKT6	O15498	198 aa		6.19	□□□□□ -1.42
ATXN3-223	ENST00000553686	MT-CO3	P00414	261 aa		6.19	□□□□□ -1.42
ATXN3-223	ENST00000553686	SBK3	P0C264	359 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms