RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ZNF284Q2VY69 593 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SEL1L3Q68CR1 1132 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 KDELC2Q7Z4H8 507 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 ZCCHC9Q8N567 271 aaKnown RBP13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PIH1D2Q8WWB5 315 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 KLK6Q92876 244 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SKA1Q96BD8 255 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 TADA1Q96BN2 335 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 RTP4Q96DX8 246 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SCRN2Q96FV2 425 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 MLPHQ9BV36 600 aaPredicted RBP13.91□□□□□ -0.18
TUBB3-202ENST00000553656 AASDHPPTQ9NRN7 309 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 SMARCAL1Q9NZC9 954 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 PAK5Q9P286 719 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 RNF14Q9UBS8 474 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 B4GALT6Q9UBX8 382 aa13.91□□□□□ -0.18
TUBB3-202ENST00000553656 DRG1Q9Y295 367 aaKnown RBP13.91□□□□□ -0.18
TUBB3-202ENST00000553656 CEP192Q8TEP8 1941 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 A0A0J9YYE9 177 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 A0A1B0GTW7 788 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 CAPN8A6NHC0 703 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 A8MX80 341 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 E7EVH7 732 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 PRAMEF26H0Y7S4 382 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 KIF2AO00139 706 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 GFRA3O60609 400 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 MMP20O60882 483 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 LRP3O75074 770 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 PHF2O75151 1096 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 TRBC1P01850 177 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 CFIP05156 583 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 ALPIP09923 528 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 C6P13671 934 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 HNRNPA2B1P22626 353 aaKnown RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 LMAN1P49257 510 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 LIG3P49916 1009 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 SEMG2Q02383 582 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 IHHQ14623 411 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 STAT4Q14765 748 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 DUOXA1Q1HG43 343 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 TMEM259Q4ZIN3 620 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 NAPEPLDQ6IQ20 393 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 C4orf22Q6V702 233 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 OXNAD1Q96HP4 312 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 MCCC1Q96RQ3 725 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 SRPK1Q96SB4 655 aaKnown RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 SLC17A9Q9BYT1 436 aa13.9□□□□□ -0.18
TUBB3-202ENST00000553656 FEZ2Q9UHY8 353 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 ZFR2Q9UPR6 939 aaKnown RBP13.9□□□□□ -0.18
TUBB3-202ENST00000553656 NPIPB15A6NHN6 443 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 ANKRD66B4E2M5 251 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 KHNYNO15037 678 aaKnown RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 PSMD3O43242 534 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 PAK4O96013 591 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 PRLP01236 227 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 EPOP01588 193 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 TUBB4AP04350 444 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 ZNF30P17039 623 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 HLA-DPA1P20036 260 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 HNF1BP35680 557 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 FDFT1P37268 417 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 KCNJ1P48048 391 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 AFF3P51826 1226 aaKnown RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 RACK1P63244 317 aaKnown RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 SPEM2Q0P670 501 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 RALGDSQ12967 914 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 ACOX1Q15067 660 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 CCDC6Q16204 474 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 CYP1B1Q16678 543 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 QPCTQ16769 361 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 TRIM61Q5EBN2 209 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 PEAR1Q5VY43 1037 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 DENND2CQ68D51 928 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 KDELC1Q6UW63 502 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 TAB3Q8N5C8 712 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 ATL2Q8NHH9 583 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 ASB12Q8WXK4 309 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 SLC6A18Q96N87 628 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 TRIB3Q96RU7 358 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 MYOCQ99972 504 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 FICDQ9BVA6 458 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 C1QTNF2Q9BXJ5 285 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 NUSAP1Q9BXS6 441 aaKnown RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 TMEM74BQ9NUR3 256 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.89□□□□□ -0.19
TUBB3-202ENST00000553656 PPIL1Q9Y3C6 166 aa13.89□□□□□ -0.19
TUBB3-202ENST00000553656 C1orf232A0A0U1RR37 186 aa13.88□□□□□ -0.19
TUBB3-202ENST00000553656 PSMD11O00231 422 aa13.88□□□□□ -0.19
TUBB3-202ENST00000553656 FOXD2O60548 495 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-202ENST00000553656 HEXIM1O94992 359 aaKnown RBP13.88□□□□□ -0.19
TUBB3-202ENST00000553656 METTL18O95568 372 aa13.88□□□□□ -0.19
TUBB3-202ENST00000553656 GAS8O95995 478 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms