RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CSF2RBP32927 897 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ACVRL1P37023 503 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 STAT5AP42229 794 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 SUOXP51687 545 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 GEMIN4P57678 1058 aaKnown RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 KIAA1024LP59773 190 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 RAD51Q06609 339 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 DPYDQ12882 1025 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ERV3-1Q14264 604 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 AGERQ15109 404 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ARTNQ5T4W7 220 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ACBD5Q5T8D3 534 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 OTUD1Q5VV17 481 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 TMEM71Q6P5X7 295 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 DRC7Q8IY82 874 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 PLA2G15Q8NCC3 412 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 TCTN2Q96GX1 697 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 CPXM1Q96SM3 734 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ZYG11BQ9C0D3 744 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 DKK3Q9UBP4 350 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ARMCX3Q9UH62 379 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ERRFI1Q9UJM3 462 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-204ENST00000553605 CNTN6Q9UQ52 1028 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
PRPF39-204ENST00000553605 ITPR3Q14573 2671 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 ARHGEF17Q96PE2 2063 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-204ENST00000553605 A0A1B0GVL5 298 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 PPM1DO15297 605 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 THAP12O43422 761 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 DAB1O75553 588 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 FURINP09958 794 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 CCNB1P14635 433 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 BMP6P22004 513 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 STAT1P42224 750 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
PRPF39-204ENST00000553605 LIG3P49916 1009 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 PMS2P54278 862 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 GCNT1Q02742 428 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
PRPF39-204ENST00000553605 NADK2Q4G0N4 442 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 LEKR1Q6ZMV7 388 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 C11orf57Q6ZUT1 292 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-204ENST00000553605 FAM183BPQ6ZVS7 135 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 ARHGEF19Q8IW93 802 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 SLC34A3Q8N130 599 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 WDTC1Q8N5D0 677 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 ESX1Q8N693 406 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 HMCESQ96FZ2 354 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 NPY6RQ99463 290 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 FBXO8Q9NRD0 319 aa13.87□□□□□ -0.19
PRPF39-204ENST00000553605 SHANK1Q9Y566 2161 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 A8MU76 341 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 PMM2O15305 246 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 INPP4BO15327 924 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 SORBS2O94875 1100 aaKnown RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 DLGAP3O95886 979 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 HOXC4P09017 264 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 PFKFB1P16118 471 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 TFE3P19532 575 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 DLSTP36957 453 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 ETFBP38117 255 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 FKBP3Q00688 224 aaKnown RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 DEUP1Q05D60 604 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 INPP5JQ15735 1006 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 OLFML1Q6UWY5 402 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 NRROSQ86YC3 692 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 PDCD6IPQ8WUM4 868 aaKnown RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 PATE1Q8WXA2 126 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 KREMEN1Q96MU8 473 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 GDAP1L1Q96MZ0 367 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 GSDMCQ9BYG8 508 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 TTYH3Q9C0H2 523 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 ZMYND15Q9H091 742 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 APMAPQ9HDC9 416 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 RRN3Q9NYV6 651 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 TAAR2Q9P1P5 351 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 PDP2Q9P2J9 529 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 HPCAL4Q9UM19 191 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 OAS3Q9Y6K5 1087 aaKnown RBP13.86□□□□□ -0.19
PRPF39-204ENST00000553605 ZFHX3Q15911 3703 aa13.86□□□□□ -0.19
PRPF39-204ENST00000553605 HIVEP3Q5T1R4 2406 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 PRSS38A1L453 326 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 F9P00740 461 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 GNA15P30679 374 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 SULT1E1P49888 294 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 SLC6A3Q01959 620 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 CETN1Q12798 172 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 ILF3Q12906 894 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 MAP7Q14244 749 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 NAA30Q147X3 362 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 KRTAP21-3Q3LHN1 58 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 SNAP47Q5SQN1 464 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms