RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FUBP1Q96AE4 644 aaKnown RBP9.14□□□□□ -0.95
SYNE2-209ENST00000553308 NUDT22Q9BRQ3 303 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 ADNPQ9H2P0 1102 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 DPEP2Q9H4A9 486 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 RETREG1Q9H6L5 497 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 DAAM1Q9Y4D1 1078 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 UNC13CQ8NB66 2214 aa9.14□□□□□ -0.95
SYNE2-209ENST00000553308 BOD1L1Q8NFC6 3051 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 C2CD4BA6NLJ0 364 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 RASA4BC9J798 803 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 STMND1H3BQB6 276 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CACNB4O00305 520 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 RASA4O43374 803 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 B4GAT1O43505 415 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 NUDT21O43809 227 aaKnown RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 BUB1BO60566 1050 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 RECQL5O94762 991 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CPNE6O95741 557 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 LIFP15018 202 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 SDC4P31431 198 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 SUOXP51687 545 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 POLE2P56282 527 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 HDAC4P56524 1084 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 OR1D5P58170 312 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 RALGDSQ12967 914 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 KCNAB2Q13303 367 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CYTH1Q15438 398 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 IGFBP7Q16270 282 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 MAN2A1Q16706 1144 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 INO80DQ53TQ3 878 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 TMEM164Q5U3C3 297 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 BORAQ6PGQ7 559 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 PIM3Q86V86 326 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 DNAAF5Q86Y56 855 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CAMK1DQ8IU85 385 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 PELI3Q8N2H9 469 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 RTL3Q8N8U3 475 aaKnown RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 EPS8L1Q8TE68 723 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 FAM172AQ8WUF8 416 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 SLC20A1Q8WUM9 679 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CASKIN2Q8WXE0 1202 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 NKD1Q969G9 470 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CCDC74BQ96LY2 380 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 LGR4Q9BXB1 951 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 B3GNT4Q9C0J1 378 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 SUV39H2Q9H5I1 410 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 SUDS3Q9H7L9 328 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-209ENST00000553308 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 SEPT3Q9UH03 358 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 MOSPD1Q9UJG1 213 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 ATP8A1Q9Y2Q0 1164 aa9.13□□□□□ -0.95
SYNE2-209ENST00000553308 IGHV5-10-1A0A0J9YXX1 117 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 PRSS38A1L453 326 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 NTRK1P04629 796 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 FGF3P11487 239 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 GP1BBP13224 206 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 GM2AP17900 193 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 EPHB2P29323 1055 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 ALDH4A1P30038 563 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 PTPN9P43378 593 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 RGRP47804 291 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 ATP1A2P50993 1020 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 FOXK1P85037 733 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 SERINC3Q13530 473 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 MIIPQ5JXC2 388 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 CFAP58Q5T655 872 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 KLHDC7AQ5VTJ3 777 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 BRAT1Q6PJG6 821 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 STRADAQ7RTN6 431 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 ZNF438Q7Z4V0 828 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 IL22RA1Q8N6P7 574 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 SLC30A5Q8TAD4 765 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 KIAA1524Q8TCG1 905 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 HCAR2Q8TDS4 363 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 CENPIQ92674 756 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 NTAN1Q96AB6 310 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 C11orf70Q9BRQ4 267 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 NDST4Q9H3R1 872 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 PDFQ9HBH1 243 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 SPATS2LQ9NUQ6 558 aaKnown RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 AKAP7Q9P0M2 348 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 UBA2Q9UBT2 640 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 B3GALT1Q9Y5Z6 326 aa9.12□□□□□ -0.95
SYNE2-209ENST00000553308 TLN1Q9Y490 2541 aaKnown RBP9.12□□□□□ -0.95
SYNE2-209ENST00000553308 CLEC18AA5D8T8 446 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 RHPN2P1A8MT19 583 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 F8VZ95 297 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 J3KR12 359 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 TNFRSF10CO14798 259 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 HGSO14964 777 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CREB3O43889 395 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CYP1A1P04798 512 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CCNB1P14635 433 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 UCHL3P15374 230 aa9.11□□□□□ -0.95
SYNE2-209ENST00000553308 CR2P20023 1033 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms