RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RALGDSQ12967 914 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 TARDBPQ13148 414 aaKnown RBP eCLIP13.02□□□□□ -0.33
ACTN1-207ENST00000553290 MTM1Q13496 603 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 INPP5AQ14642 412 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 ATP13A4Q4VNC1 1196 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 PRRT3Q5FWE3 981 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 FAXCQ5TGI0 409 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-207ENST00000553290 CNGA4Q8IV77 575 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 RBFAQ8N0V3 343 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 PGBD5Q8N414 524 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 CHP1Q99653 195 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 APOOQ9BUR5 198 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-207ENST00000553290 NOD2Q9HC29 1040 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 HAUS2Q9NVX0 235 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 KCTD5Q9NXV2 234 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 PCDHGC4Q9Y5F7 938 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 MYLKQ15746 1914 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 AKR1B15C9JRZ8 316 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 LMO7DNF2Z398 122 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 MFSD11O43934 449 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 RECQL5O94762 991 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CPP00450 1065 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 ANXA6P08133 673 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CES1P23141 567 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CCNCP24863 283 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 ARHGAP25P42331 645 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 HK3P52790 923 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CLDN6P56747 220 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 MAXP61244 160 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 INSM1Q01101 510 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CYP4F3Q08477 520 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 GALNT2Q10471 571 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 MESDQ14696 234 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 NFATC4Q14934 902 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 ELOCQ15369 112 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 IFI16Q16666 785 aaKnown RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 DEFB133Q30KQ1 61 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 NCBP2-AS2Q69YL0 99 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CPNE8Q86YQ8 564 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 FSTL5Q8N475 847 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 TEX26Q8N6G2 289 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 PDCD6IPQ8WUM4 868 aaKnown RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 GLMNQ92990 594 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 FATE1Q969F0 183 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 NXPE2Q96DL1 559 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 TCEAL2Q9H3H9 227 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 B4GALT6Q9UBX8 382 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 AMACRQ9UHK6 382 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 PNMA8BQ9ULN7 279 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 PHTF1Q9UMS5 762 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
ACTN1-207ENST00000553290 ANKRD11Q6UB99 2663 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-207ENST00000553290 LY6G6EA0A0G2JKS1 128 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 MATN3O15232 486 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 OPA1O60313 960 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 GCATO75600 419 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 MTA2O94776 668 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 RASGRP1O95267 797 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 PCCBP05166 539 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 CYP2A6P11509 494 aaPredicted RBP13□□□□□ -0.33
ACTN1-207ENST00000553290 KRT10P13645 584 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 CTSEP14091 401 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 MX2P20592 715 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 VIPR1P32241 457 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 C1orf61Q13536 156 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 ACOX1Q15067 660 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 ARMC12Q5T9G4 340 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 SARM1Q6SZW1 724 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 ENPP7Q6UWV6 458 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 HID1Q8IV36 788 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 NDUFAF2Q8N183 169 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 DCBLD1Q8N8Z6 715 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 MAML1Q92585 1016 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 WDR92Q96MX6 357 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 TSGA13Q96PP4 275 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 LRRC61Q9BV99 259 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 BOCQ9BWV1 1114 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 NRSN2Q9GZP1 204 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 POLR1EQ9GZS1 481 aaKnown RBP13□□□□□ -0.33
ACTN1-207ENST00000553290 ABCG4Q9H172 646 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 NT5MQ9NPB1 228 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 KLQ9UEF7 1012 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 INTUQ9ULD6 942 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 OR1A2Q9Y585 309 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 U3KQA8 63 aa13□□□□□ -0.33
ACTN1-207ENST00000553290 DSPP15924 2871 aaKnown RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ACACAQ13085 2346 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms