RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MCEMP1Q8IX19 187 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 CADM3Q8N126 398 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 C10orf53Q8N6V4 93 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 TSPAN14Q8NG11 270 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 HARBI1Q96MB7 349 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 NUP85Q9BW27 656 aa5.93□□□□□ -1.46
SCFD1-208ENST00000553278 GATA5Q9BWX5 397 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-208ENST00000553278 LSM4Q9Y4Z0 139 aaKnown RBP5.93□□□□□ -1.46
SCFD1-208ENST00000553278 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 A0A1B0GVM2 712 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 LNP1A1A4G5 178 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 PSMD14O00487 310 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 MT-ND3P03897 115 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 CD63P08962 238 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 TACR2P21452 398 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 PSMA3P25788 255 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 RYKP34925 604 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 SOX2P48431 317 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 SELENOPP49908 381 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 CLCNKBP51801 687 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 SLC25A3Q00325 362 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 YWHAHQ04917 246 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 AP1B1Q10567 949 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ICAM4Q14773 271 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 USP41Q3LFD5 358 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ARMC4Q5T2S8 1044 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 MPP7Q5T2T1 576 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 LRRC8EQ6NSJ5 796 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ZNF449Q6P9G9 518 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 LCTLQ6UWM7 567 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 TRIM72Q6ZMU5 477 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 CAMKMTQ7Z624 323 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 SDCCAG8Q86SQ7 713 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 AACSQ86V21 672 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 IGFN1Q86VF2 1251 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 IQCHQ86VS3 1027 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 CCDC25Q86WR0 208 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ARID3BQ8IVW6 561 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 DPP10Q8N608 796 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 OR4N2Q8NGD1 307 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 RASSF8Q8NHQ8 419 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 NEU4Q8WWR8 484 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 WWC2-AS2Q96NR7 200 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 TMEM47Q9BQJ4 181 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 C1QTNF5Q9BXJ0 243 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 MMADHCQ9H3L0 296 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ZNF703Q9H7S9 590 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ACTR5Q9H9F9 607 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 PAPOLBQ9NRJ5 636 aaKnown RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 ADPRHL2Q9NX46 363 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 DDX43Q9NXZ2 648 aaKnown RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 COQ3Q9NZJ6 369 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 DNAJB9Q9UBS3 223 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 IPO11Q9UI26 975 aaKnown RBP5.92□□□□□ -1.46
SCFD1-208ENST00000553278 KLHL20Q9Y2M5 609 aa5.92□□□□□ -1.46
SCFD1-208ENST00000553278 H7C1Q1 480 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 IPO8O15397 1037 aaKnown RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 OGG1O15527 345 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 DAB1O75553 588 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TMCC1O94876 653 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 HIST1H2ABP04908 130 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 HIST1H2ADP20671 130 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 PTGS2P35354 604 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 SUOXP51687 545 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 MRPS35P82673 323 aaKnown RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 HOXA4Q00056 320 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 CXCL9Q07325 125 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 RALGDSQ12967 914 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 GRIK3Q13003 919 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 MTA1Q13330 715 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 PTK6Q13882 451 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 NFE2L1Q14494 772 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 FAM153CQ494X1 144 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TTC31Q49AM3 519 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 CES5AQ6NT32 575 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 KCNV1Q6PIU1 500 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 CYB5R4Q7L1T6 521 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 HIST3H2AQ7L7L0 130 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TAOK1Q7L7X3 1001 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TFAP2DQ7Z6R9 452 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TMC8Q8IU68 726 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 CCDC13Q8IYE1 715 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 SCYL3Q8IZE3 742 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 PI4KAP1Q8N8J0 262 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 IQUBQ8NA54 791 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 WIPF2Q8TF74 440 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TEKT4Q8WW24 435 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 LPGAT1Q92604 370 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 PIGKQ92643 395 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 ATOH1Q92858 354 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 CEP295NLQ96MC4 621 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 MACROD1Q9BQ69 325 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 FERMT1Q9BQL6 677 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 MXRA8Q9BRK3 442 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 WDR11Q9BZH6 1224 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 FAM129AQ9BZQ8 928 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 TKTL2Q9H0I9 626 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 CWC15Q9P013 229 aaKnown RBP5.91□□□□□ -1.46
SCFD1-208ENST00000553278 ST3GAL5Q9UNP4 418 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 ZNF148Q9UQR1 794 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms