RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KIF19Q2TAC6 998 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 ZNF569Q5MCW4 686 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 DARS2Q6PI48 645 aaKnown RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 KDM7AQ6ZMT4 941 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 DPPA4Q7L190 304 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 ADAT2Q7Z6V5 191 aaKnown RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 SLC13A5Q86YT5 568 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 ZNF567Q8N184 647 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 SLC35F6Q8N357 371 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 TTC13Q8NBP0 860 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 TMEM145Q8NBT3 493 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 SPATA22Q8NHS9 363 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 SLC25A51Q9H1U9 297 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 KLHL8Q9P2G9 620 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-226ENST00000553011 PHTF1Q9UMS5 762 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
PTCH1-226ENST00000553011 A0A0U1RQS6 177 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 A0A1W2PQ67 120 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 NPIPB15A6NHN6 443 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-226ENST00000553011 C4orf47A7E2U8 309 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 VILLO15195 856 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 KCNN4O15554 427 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 TM7SF2O76062 418 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 MT-CYBP00156 380 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-226ENST00000553011 SYPP08247 313 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 ALPIP09923 528 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 C6P13671 934 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 AKT2P31751 481 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 CXCR5P32302 372 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 ARHGAP8P85298 464 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 STAT4Q14765 748 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 STPG1Q5TH74 334 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 LIPIQ6XZB0 460 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 GCNT7Q6ZNI0 430 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 PID1Q7Z2X4 250 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 ZSCAN30Q86W11 494 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 MINDY1Q8N5J2 469 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 LPCAT1Q8NF37 534 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 ASB12Q8WXK4 309 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 ATG4AQ8WYN0 398 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 MCCC1Q96RQ3 725 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-226ENST00000553011 VAT1Q99536 393 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 KLF6Q99612 283 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-226ENST00000553011 PCDH9Q9HC56 1237 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 TMEM9BQ9NQ34 198 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 UBP1Q9NZI7 540 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 SNX11Q9Y5W9 270 aa14.18□□□□□ -0.14
PTCH1-226ENST00000553011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTCH1-226ENST00000553011 POM121BA6NF01 834 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 GOLGA8CPA6NN73 597 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 CEP104O60308 925 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 PMPCBO75439 489 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 ELFN1P0C7U0 828 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 CA4P22748 312 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 LHCGRP22888 699 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 VIPR1P32241 457 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 CTSKP43235 329 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 ATXN3P54252 364 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-226ENST00000553011 EPHB1P54762 984 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 C21orf59P57076 290 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 CNGA3Q16281 694 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 PCSK7Q16549 785 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 RSPO4Q2I0M5 234 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-226ENST00000553011 KDELC2Q7Z4H8 507 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 TSPAN33Q86UF1 283 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 MFSD2AQ8NA29 543 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 SLC35B2Q8TB61 432 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 NETO1Q8TDF5 533 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 TADA1Q96BN2 335 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 SCRN2Q96FV2 425 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 BMFQ96LC9 184 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 LENG8Q96PV6 779 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-226ENST00000553011 ZDHHC5Q9C0B5 715 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 IL21RQ9HBE5 538 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 USP29Q9HBJ7 922 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 TRHDEQ9UKU6 1024 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 DNPEPQ9ULA0 475 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 PPIL1Q9Y3C6 166 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 JRKLQ9Y4A0 524 aa14.17□□□□□ -0.14
PTCH1-226ENST00000553011 SCN8AQ9UQD0 1980 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 A0A0J9YYE9 177 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 TLR4O00206 839 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 KIF5CO60282 957 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 LZTS3O60299 673 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 HEXIM1O94992 359 aaKnown RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 TRBC1P01850 177 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 CYP2A6P11509 494 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 GM2AP17900 193 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 HNF1BP35680 557 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 IGFALSP35858 605 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 NXPH1P58417 271 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 GALNT3Q14435 633 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 SIX1Q15475 284 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 SLC14A2Q15849 920 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 QPCTQ16769 361 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 HLA-BQ31612 363 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 UAP1L1Q3KQV9 507 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 PRAMEF14Q5SWL7 426 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 DENND2CQ68D51 928 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 KDELC1Q6UW63 502 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms