RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ALDH4A1P30038 563 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TTKP33981 857 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ALDH3B2P48448 385 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 MAXP61244 160 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RFTN1Q14699 578 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 KYAT1Q16773 422 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RABL3Q5HYI8 236 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PPP4R4Q6NUP7 873 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TICAM1Q8IUC6 712 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 HPS1Q92902 700 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 COG8Q96MW5 612 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ZMAT2Q96NC0 199 aaKnown RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 EIF2AQ9BY44 585 aaKnown RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RAD21L1Q9H4I0 556 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PCDH12Q9NPG4 1184 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CACNG4Q9UBN1 327 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TIMM22Q9Y584 194 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ST14Q9Y5Y6 855 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 NCAM2O15394 837 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 BMP10O95393 424 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 JAK1P23458 1154 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ELK4P28324 431 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 HALP42357 657 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 BMXP51813 675 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PPIL2Q13356 520 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CYP2A13Q16696 494 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TMTC4Q5T4D3 741 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 HMBOX1Q6NT76 420 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ADCK1Q86TW2 530 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SFRP1Q8N474 314 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 B3GALNT2Q8NCR0 500 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TSPAN17Q96FV3 270 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ANKRD60Q9BZ19 345 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SEPT3Q9UH03 358 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 VPS28Q9UK41 221 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RAD54BQ9Y620 910 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CHEK2O96017 543 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 CD247P20963 164 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 BCAP31P51572 246 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TRAP1Q12931 704 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 DGCR6Q14129 220 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TGFBIQ15582 683 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 UNC93AQ86WB7 457 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 NPWQ8N729 165 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 DQX1Q8TE96 717 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TFAP2CQ92754 450 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 GLMNQ92990 594 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TUT1Q9H6E5 874 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 MRGBPQ9NV56 204 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 CITO14578 2027 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 IGKV6D-21A0A0A0MT36 114 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 YJEFN3A6XGL0 299 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 NPHS1O60500 1241 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 PIGFQ07326 219 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TIGD2Q4W5G0 525 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 PAN2Q504Q3 1202 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 PDCD4Q53EL6 469 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 WSCD1Q658N2 575 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 SLC15A4Q8N697 577 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TEKT5Q96M29 485 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 NSMCE2Q96MF7 247 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 RPF2Q9H7B2 306 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TBCCD1Q9NVR7 557 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 AP3B1O00203 1094 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 KPNA4O00629 521 aaPredicted RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TSPAN3O60637 253 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 RSL1D1O76021 490 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 LRIG2O94898 1065 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 ZNF12P17014 697 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 NPR3P17342 541 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 CD97P48960 835 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 RBBP7Q16576 425 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 DNAJC14Q6Y2X3 702 aaPredicted RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 Q6ZNX1 250 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 PLPPR4Q7Z2D5 763 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 CLEC14AQ86T13 490 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 CMTR2Q8IYT2 770 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TAMM41Q96BW9 452 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 TMEM74Q96NL1 305 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 BDH2Q9BUT1 245 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 RCOR3Q9P2K3 495 aaPredicted RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 CNOT11Q9UKZ1 510 aaKnown RBP11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 ATP11BQ9Y2G3 1177 aa11.62□□□□□ -0.55
PPFIA2-227ENST00000552948 A0A087X1B8 175 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 C16orf96A6NNT2 1141 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 TBC1D4O60343 1298 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 TSPAN1O60635 241 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 SNAP91O60641 907 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 BEST1O76090 585 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 COL6A2P12110 1019 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 MAGP20916 626 aa11.61□□□□□ -0.55
PPFIA2-227ENST00000552948 GABRB3P28472 473 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms