RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 TAAR9Q96RI9 348 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 HAPLN3Q96S86 360 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 C1QTNF7Q9BXJ2 289 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 DPEP2Q9H4A9 486 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 NOL6Q9H6R4 1146 aaKnown RBP8.54□□□□□ -1.04
CDK4-213ENST00000552713 LRRC4CQ9HCJ2 640 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 SPATS2LQ9NUQ6 558 aaKnown RBP8.54□□□□□ -1.04
CDK4-213ENST00000552713 OCIAD1Q9NX40 245 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 RRN3Q9NYV6 651 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 TMEM9Q9P0T7 183 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
CDK4-213ENST00000552713 PLEKHB1Q9UF11 243 aaPredicted RBP8.54□□□□□ -1.04
CDK4-213ENST00000552713 STAP1Q9ULZ2 295 aa8.54□□□□□ -1.04
CDK4-213ENST00000552713 LOC101059948A0A1B0GTJ6 334 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 PSMA7O14818 248 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 NUDT21O43809 227 aaKnown RBP8.53□□□□□ -1.04
CDK4-213ENST00000552713 CPNE6O95741 557 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 F9P00740 461 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 FUCA1P04066 466 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 GM2AP17900 193 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 HTR1BP28222 390 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 CD1CP29017 333 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 ALDH4A1P30038 563 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 CSF2RBP32927 897 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 CD97P48960 835 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 STX17P56962 302 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 POLD3Q15054 466 aaPredicted RBP8.53□□□□□ -1.04
CDK4-213ENST00000552713 FAM102AQ5T9C2 384 aaPredicted RBP8.53□□□□□ -1.04
CDK4-213ENST00000552713 ZNF438Q7Z4V0 828 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 C17orf82Q86X59 251 aaPredicted RBP8.53□□□□□ -1.04
CDK4-213ENST00000552713 XYLT1Q86Y38 959 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 NRROSQ86YC3 692 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 UNC5BQ8IZJ1 945 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 CACNA2D3Q8IZS8 1091 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 PTCD2Q8WV60 388 aaKnown RBP8.53□□□□□ -1.04
CDK4-213ENST00000552713 NELFBQ8WX92 580 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 SMARCE1Q969G3 411 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 EXOC2Q96KP1 924 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 TTYH3Q9C0H2 523 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 CDH19Q9H159 772 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 SYNCQ9H7C4 482 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 PCDH12Q9NPG4 1184 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 DKK3Q9UBP4 350 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 MAN1B1Q9UKM7 699 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 CTNND2Q9UQB3 1225 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDK4-213ENST00000552713 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
CDK4-213ENST00000552713 ITPR2Q14571 2701 aa8.52□□□□□ -1.04
CDK4-213ENST00000552713 SPENQ96T58 3664 aaKnown RBP8.52□□□□□ -1.04
CDK4-213ENST00000552713 MDC1Q14676 2089 aaKnown RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 CXorf51AA0A1B0GTR3 108 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 PRR19A6NJB7 356 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 ZNF891A8MT65 544 aaPredicted RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 GOLGA8SH3BPF8 625 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 FOXN3O00409 490 aaPredicted RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 HGSO14964 777 aaPredicted RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 BUB1O43683 1085 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 KDELR3O43731 214 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 BUB1BO60566 1050 aaPredicted RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 RAD1O60671 282 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 FGF1P05230 155 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 KRT7P08729 469 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 MMP12P39900 470 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 GABRB2P47870 512 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 LIG3P49916 1009 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 LIMK2P53671 638 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 MARSP56192 900 aaKnown RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 KIAA1024LP59773 190 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 ATP11AP98196 1134 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 CDC20Q12834 499 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 RALGDSQ12967 914 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 MTM1Q13496 603 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 NR1D2Q14995 579 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 UGP2Q16851 508 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 DEFB109BQ30KR1 87 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 ANKS6Q68DC2 871 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 RWDD4Q6NW29 188 aaKnown RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 ENOSF1Q7L5Y1 443 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 TIPARPQ7Z3E1 657 aaKnown RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 PHLDB2Q86SQ0 1253 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 EMC1Q8N766 993 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 OR56A4Q8NGH8 313 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 GPBAR1Q8TDU6 330 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 RNF31Q96EP0 1072 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 HMCESQ96FZ2 354 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 SLC45A3Q96JT2 553 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 GDAP1L1Q96MZ0 367 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 SPRY4Q9C004 299 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 MAGEH1Q9H213 219 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 SUDS3Q9H7L9 328 aaPredicted RBP8.52□□□□□ -1.05
CDK4-213ENST00000552713 CYP4F12Q9HCS2 524 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 SIX2Q9NPC8 291 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 TMEM248Q9NWD8 314 aa8.52□□□□□ -1.05
CDK4-213ENST00000552713 SLC39A1Q9NY26 324 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms