RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 CDK5RAP3Q96JB5 506 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 ACCSQ96QU6 501 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 NUDT9Q9BW91 350 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 STRA6Q9BX79 667 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 SEMA3GQ9NS98 782 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 EXOC7Q9UPT5 735 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 PCDHGB7Q9Y5F8 929 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 FADS3Q9Y5Q0 445 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 LRP4O75096 1905 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 A0A1B0GUH1 482 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 TYW5A2RUC4 315 aaKnown RBP8.38□□□□□ -1.07
PRIM1-208ENST00000552590 ZNF233A6NK53 670 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 F5H423 210 aaPredicted RBP8.38□□□□□ -1.07
PRIM1-208ENST00000552590 C19orf84I3L1E1 186 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 RASGRP1O95267 797 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 PDGFRAP16234 1089 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 TNNI1P19237 187 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 CSF2RBP32927 897 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 STAT1P42224 750 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 MAZP56270 477 aaKnown RBP8.38□□□□□ -1.07
PRIM1-208ENST00000552590 DNM1Q05193 864 aaKnown RBP8.38□□□□□ -1.07
PRIM1-208ENST00000552590 FOXM1Q08050 763 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 SURF1Q15526 300 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 L1TD1Q5T7N2 865 aaKnown RBP8.38□□□□□ -1.07
PRIM1-208ENST00000552590 KCTD16Q68DU8 428 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 SLC47A2Q86VL8 602 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 VPS36Q86VN1 386 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 SYCP3Q8IZU3 236 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 CHST14Q8NCH0 376 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 FDCSPQ8NFU4 85 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 GRIN3AQ8TCU5 1115 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 CHTF18Q8WVB6 975 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 ERCC4Q92889 916 aaPredicted RBP8.38□□□□□ -1.07
PRIM1-208ENST00000552590 CENPTQ96BT3 561 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 SLC30A3Q99726 388 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 ZPBPQ9BS86 351 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 HDAC8Q9BY41 377 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 TBC1D7Q9P0N9 293 aa8.38□□□□□ -1.07
PRIM1-208ENST00000552590 CHD5Q8TDI0 1954 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 A6NL46 340 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 RHPN2P1A8MT19 583 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 A8MU76 341 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 PFKFB2O60825 505 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 MED26O95402 600 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 FOSL1P15407 271 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 ZNF28P17035 718 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 CASP14P31944 242 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 MAN1A1P33908 653 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 YPEL5P62699 121 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 SULT2A1Q06520 285 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 MAP7Q14244 749 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 CLPPQ16740 277 aaPredicted RBP8.37□□□□□ -1.07
PRIM1-208ENST00000552590 CRB2Q5IJ48 1285 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 SNAP47Q5SQN1 464 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 SPECC1LQ69YQ0 1117 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 ENPP7Q6UWV6 458 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 DTHD1Q6ZMT9 781 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 BHLHA9Q7RTU4 235 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 TAF8Q7Z7C8 310 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 MRGPRGQ86SM5 289 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 DENND6BQ8NEG7 585 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 TMIEQ8NEW7 156 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 ZDHHC1Q8WTX9 485 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 RNF139Q8WU17 664 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 SYAP1Q96A49 352 aaPredicted RBP8.37□□□□□ -1.07
PRIM1-208ENST00000552590 TWNKQ96RR1 684 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 DUSP16Q9BY84 665 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 DPEP2Q9H4A9 486 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 MBNL1Q9NR56 388 aaKnown RBP8.37□□□□□ -1.07
PRIM1-208ENST00000552590 OLA1Q9NTK5 396 aaKnown RBP8.37□□□□□ -1.07
PRIM1-208ENST00000552590 CYP46A1Q9Y6A2 500 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 HIVEP2P31629 2446 aa8.37□□□□□ -1.07
PRIM1-208ENST00000552590 E2F3O00716 465 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 STX6O43752 255 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 CEACAM4O75871 244 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 STSP08842 583 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 ADRB3P13945 408 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 NOS3P29474 1203 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 ATICP31939 592 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 GLRBP48167 497 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 CASP5P51878 434 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 NEK3P51956 506 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 IST1P53990 364 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 AAMPQ13685 434 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 ZNF699Q32M78 642 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 ZNF667Q5HYK9 610 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 MS4A13Q5J8X5 152 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 C6orf15Q6UXA7 325 aaPredicted RBP8.36□□□□□ -1.07
PRIM1-208ENST00000552590 BIVMQ86UB2 503 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 KCNMB4Q86W47 210 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 HPS6Q86YV9 775 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 CEP97Q8IW35 865 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 OR2A12Q8NGT7 310 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 INPP5DQ92835 1189 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 RNF34Q969K3 372 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 CCDC127Q96BQ5 260 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 ARSGQ96EG1 525 aa8.36□□□□□ -1.07
PRIM1-208ENST00000552590 RBM15Q96T37 977 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRIM1-208ENST00000552590 ULBP3Q9BZM4 244 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms