RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	NAF1	Q96HR8	494 aa	Known RBP	4.28	□□□□□ -1.72
USP44-208	ENST00000552440	LINC00615	Q96LM1	132 aa	Predicted RBP	4.28	□□□□□ -1.72
USP44-208	ENST00000552440	MYOC	Q99972	504 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	SRSF8	Q9BRL6	282 aa	Known RBP	4.28	□□□□□ -1.72
USP44-208	ENST00000552440	NUDT22	Q9BRQ3	303 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.28	□□□□□ -1.72
USP44-208	ENST00000552440	LRRCC1	Q9C099	1032 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
USP44-208	ENST00000552440	NRDE2	Q9H7Z3	1164 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	TMEM206	Q9H813	350 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	RLIM	Q9NVW2	624 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	TMOD3	Q9NYL9	352 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	MOCS1	Q9NZB8	636 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	NR2E1	Q9Y466	385 aa		4.28	□□□□□ -1.72
USP44-208	ENST00000552440	TEX13C	A0A0J9YWL9	993 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	PMS2P1	A4D2B8	440 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440		A6NL46	340 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	ANXA2P2	A6NMY6	339 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	PPEF2	O14830	753 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	POLR2D	O15514	142 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	GPRIN2	O60269	458 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	SLC43A1	O75387	559 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	AKAP3	O75969	853 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	TGFA	P01135	160 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	S100A9	P06702	114 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	CHN1	P15882	459 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	TRIM21	P19474	475 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	ACO1	P21399	889 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	GAL	P22466	123 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	DNAJB1	P25685	340 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	CD6	P30203	668 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	CPOX	P36551	454 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	EPS15	P42566	896 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	HAND2	P61296	217 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	NIPAL4	Q0D2K0	466 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	KLF10	Q13118	480 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	IDI1	Q13907	227 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	DPYS	Q14117	519 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	AAK1	Q2M2I8	961 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	CCDC57	Q2TAC2	916 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	ZNF750	Q32MQ0	723 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	LSM12	Q3MHD2	195 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	UBAP2	Q5T6F2	1119 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	ADGRE4P	Q86SQ3	457 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	FUK	Q8N0W3	1084 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	RASGEF1C	Q8N431	466 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	BCL2L2	Q92843	193 aa	Predicted RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	MCRS1	Q96EZ8	462 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	NRBF2	Q96F24	287 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	SAMD8	Q96LT4	415 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	KLHL15	Q96M94	604 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	CCDC77	Q9BR77	488 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	KIFC3	Q9BVG8	833 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	IMPG2	Q9BZV3	1241 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	B3GNT4	Q9C0J1	378 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	KCNH6	Q9H252	994 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	OSGEPL1	Q9H4B0	414 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	NGB	Q9NPG2	151 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	PRMT8	Q9NR22	394 aa	Predicted RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	TLR8	Q9NR97	1041 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	RRP7BP	Q9NSQ0	103 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	ANKMY1	Q9P2S6	941 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	C11orf21	Q9P2W6	132 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	TRPC4	Q9UBN4	977 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	MKLN1	Q9UL63	735 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	GABRQ	Q9UN88	632 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	SLC8A2	Q9UPR5	921 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	OSGIN2	Q9Y236	505 aa		4.27	□□□□□ -1.73
USP44-208	ENST00000552440	TDRKH	Q9Y2W6	561 aa	Known RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440		V9GYY5	206 aa	Predicted RBP	4.27	□□□□□ -1.73
USP44-208	ENST00000552440	LOC100509620	A0A075B734	347 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	FOXO6	A8MYZ6	492 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	KDM4E	B2RXH2	506 aa	Predicted RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440		H0YIN7	160 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	PAPSS1	O43252	624 aa	Predicted RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	SPRY1	O43609	319 aa	Predicted RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	BUB1	O43683	1085 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	PAGE4	O60829	102 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	FGFR1OP	O95684	399 aa	Known RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	PIM1	P11309	404 aa	Predicted RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	ACP5	P13686	325 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	EPOR	P19235	508 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	SLC6A4	P31645	630 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	CCR1	P32246	355 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	FASLG	P48023	281 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	METAP1	P53582	386 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	PDE1A	P54750	535 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	INHBC	P55103	352 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	TIRAP	P58753	221 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	ST8SIA6	P61647	398 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	GFPT1	Q06210	699 aa	Predicted RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	DPYSL2	Q16555	572 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	HADH	Q16836	314 aa	Known RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	ASTE1	Q2TB18	679 aa	Predicted RBP	4.26	□□□□□ -1.73
USP44-208	ENST00000552440	DPCR1	Q3MIW9	517 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	CFAP221	Q4G0U5	840 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	KCTD21	Q4G0X4	260 aa		4.26	□□□□□ -1.73
USP44-208	ENST00000552440	LRRC23	Q53EV4	343 aa	Predicted RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms