RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 SYTL3Q4VX76 610 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 TAF1BQ53T94 588 aaPredicted RBP8.21□□□□□ -1.09
CHPT1-208ENST00000552215 ASTLQ6HA08 431 aaPredicted RBP8.21□□□□□ -1.09
CHPT1-208ENST00000552215 C22orf39Q6P5X5 142 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 TRMT11Q7Z4G4 463 aaKnown RBP8.21□□□□□ -1.09
CHPT1-208ENST00000552215 ADCK2Q7Z695 626 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 OR2AP1Q8NGE2 309 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 RPLP0P6Q8NHW5 317 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 PIP4K2CQ8TBX8 421 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 AENQ8WTP8 325 aaKnown RBP8.21□□□□□ -1.09
CHPT1-208ENST00000552215 SH3KBP1Q96B97 665 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 EBNA1BP2Q99848 306 aaKnown RBP8.21□□□□□ -1.09
CHPT1-208ENST00000552215 OGFRQ9NZT2 677 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 CA5BQ9Y2D0 317 aa8.21□□□□□ -1.09
CHPT1-208ENST00000552215 CFAP20Q9Y6A4 193 aaKnown RBP8.21□□□□□ -1.09
CHPT1-208ENST00000552215 C5orf60A6NFR6 353 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 HOXB8P17481 243 aaPredicted RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 HOXC13P31276 330 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CCT5P48643 541 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 XRCC4Q13426 336 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CRYMQ14894 314 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 ANKRD20A4Q4UJ75 823 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CARD16Q5EG05 197 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 HIBCHQ6NVY1 386 aaPredicted RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 USP45Q70EL2 814 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 TRMT10CQ7L0Y3 403 aaKnown RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 MAFAQ8NHW3 353 aaPredicted RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 SIPA1Q96FS4 1042 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 MYRFLQ96LU7 910 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 PRMT1Q99873 361 aaKnown RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CLPBQ9H078 707 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 NOL6Q9H6R4 1146 aaKnown RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 ZNF358Q9NW07 568 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 AHCTF1Q8WYP5 2266 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 AP2A1O95782 977 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CDKN1CP49918 316 aaPredicted RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 ARF5P84085 180 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 TRAF2Q12933 501 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 MTERF4Q7Z6M4 381 aaKnown RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 ARFGAP2Q8N6H7 521 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 LRRC8CQ8TDW0 803 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CXorf40AQ8TE69 158 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 OSCP1Q8WVF1 389 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 MAML1Q92585 1016 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 VAT1Q99536 393 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 SUV39H2Q9H5I1 410 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 GPAMQ9HCL2 828 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 CYP8B1Q9UNU6 501 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 ERVW-1Q9UQF0 538 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 TDRKHQ9Y2W6 561 aaKnown RBP8.21□□□□□ -1.1
CHPT1-208ENST00000552215 PSAT1Q9Y617 370 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 DOCK8Q8NF50 2099 aa8.21□□□□□ -1.1
CHPT1-208ENST00000552215 TRIOO75962 3097 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 MID1O15344 667 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 LILRB3O75022 631 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CDH16O75309 829 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 GCATO75600 419 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ITGALP20701 1170 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 MAPK9P45984 424 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 DDX39BQ13838 428 aaKnown RBP8.2□□□□□ -1.1
CHPT1-208ENST00000552215 MYLK3Q32MK0 819 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 IER5LQ5T953 404 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 MRNIPQ6NTE8 343 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 LEMD2Q8NC56 503 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 NT5C3BQ969T7 300 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CERS2Q96G23 380 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 TRMT2BQ96GJ1 504 aaKnown RBP8.2□□□□□ -1.1
CHPT1-208ENST00000552215 C1orf74Q96LT6 269 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ACAT2Q9BWD1 397 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CAPS2Q9BXY5 557 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 PSMC3IPQ9P2W1 217 aaPredicted RBP8.2□□□□□ -1.1
CHPT1-208ENST00000552215 INTS6Q9UL03 887 aaKnown RBP8.2□□□□□ -1.1
CHPT1-208ENST00000552215 TMEM98Q9Y2Y6 226 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 A0A0G2JND7 137 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 HEATR9A2RTY3 570 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CHADO15335 359 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 KDELR3O43731 214 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 POP4O95707 220 aaKnown RBP8.2□□□□□ -1.1
CHPT1-208ENST00000552215 NDST3O95803 873 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 SRCP12931 536 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CHN1P15882 459 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 MGAT5Q09328 741 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 STAT4Q14765 748 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CYP4X1Q8N118 509 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CCT6BQ92526 530 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ATP6V1G3Q96LB4 118 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 EFR3BQ9Y2G0 817 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ANK1P16157 1881 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 FAM170BA6NMN3 283 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 SOX11P35716 441 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ETV3P41162 512 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 MXRA7P84157 204 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ABRQ12979 859 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 PRKG2Q13237 762 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 ZNF234Q14588 700 aa8.2□□□□□ -1.1
CHPT1-208ENST00000552215 CYTH1Q15438 398 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms