RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CCDC166P0CW27 439 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 ATP5F1P24539 256 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PGM1P36871 562 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 CCR10P46092 362 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 NSUN2Q08J23 767 aaKnown RBP eCLIP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 SLC9B1Q4ZJI4 515 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 WLSQ5T9L3 541 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 MRNIPQ6NTE8 343 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 ARHGAP24Q8N264 748 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 TXNDC5Q8NBS9 432 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 FBXO27Q8NI29 283 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 UBXN10Q96LJ8 280 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 CYP2S1Q96SQ9 504 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 MUC3BQ9H195 1237 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 C1orf21Q9H246 121 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 GPAMQ9HCL2 828 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 ZNF334Q9HCZ1 680 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 MAFFQ9ULX9 164 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 CARNS1A5YM72 827 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 HDAC3O15379 428 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 NPHS1O60500 1241 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 WISP3O95389 354 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 CRTAMO95727 393 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 EZRP15311 586 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 TFEBP19484 476 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 NCF2P19878 526 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 CDKN2DP55273 166 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 WDR5P61964 334 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 PFKPQ01813 784 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 PREPLQ4J6C6 727 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 METTL21CQ5VZV1 264 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 KLC3Q6P597 504 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 ZNF783Q6ZMS7 281 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 RNF135Q8IUD6 432 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 SPNS2Q8IVW8 549 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 OR4L1Q8NH43 312 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 AGR3Q8TD06 166 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 EXOC2Q96KP1 924 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 SLC22A12Q96S37 553 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 RNPEPL1Q9HAU8 725 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 TRPC7Q9HCX4 862 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 MRPL17Q9NRX2 175 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 NLE1Q9NVX2 485 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 ZDHHC2Q9UIJ5 367 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 CORO1CQ9ULV4 474 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 SPO11Q9Y5K1 396 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 OBSL1O75147 1896 aa14.06□□□□□ -0.16
RAB3IP-216ENST00000552199 SLCO1B7G3V0H7 640 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 GRID2O43424 1007 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TBL1XO60907 577 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 C1RP00736 705 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 PRLP01236 227 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 RBP1P09455 135 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 OGNP20774 298 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 SLC26A3P40879 764 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 RAP1GDS1P52306 607 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ZNF140P52738 457 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ARF5P84085 180 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 SEMA3AQ14563 771 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ACAP2Q15057 778 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 DNAL1Q4LDG9 190 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 PABPC1LQ4VXU2 614 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 FSCBQ5H9T9 825 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 SEL1L3Q68CR1 1132 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TMEM207Q6UWW9 146 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CCNYL1Q8N7R7 359 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ADAMTS19Q8TE59 1207 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ANKRD49Q8WVL7 239 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 STON2Q8WXE9 905 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 RMDN1Q96DB5 314 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CCDC126Q96EE4 140 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CDKN2AIPNLQ96HQ2 116 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TDRD1Q9BXT4 1180 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 IL21Q9HBE4 155 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 MAN1C1Q9NR34 630 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CATSPERZQ9NTU4 200 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 NKX1-2Q9UD57 310 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 VTI1BQ9UEU0 232 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 PLA2G4CQ9UP65 541 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CRYL1Q9Y2S2 319 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TEX28O15482 410 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 GREM1O60565 184 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 LILRB3O75022 631 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ENTPD5O75356 428 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ZMPSTE24O75844 475 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 SNUPNO95149 360 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CD160O95971 181 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 CSF2RAP15509 400 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 HOXB8P17481 243 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 PSMA3P25788 255 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 ITGB8P26012 769 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 SERPINB5P36952 375 aa14.05□□□□□ -0.16
RAB3IP-216ENST00000552199 TAF1AQ15573 450 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms