RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PPP4R1Q8TF05 950 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 CLP1Q92989 425 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 SMIM14Q96QK8 99 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 NMUR2Q9GZQ4 415 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 STN1Q9H668 368 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 SUDS3Q9H7L9 328 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 NLE1Q9NVX2 485 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 DNAJC28Q9NX36 388 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 VPS51Q9UID3 782 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 LNPEPQ9UIQ6 1025 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 LSM7Q9UK45 103 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 KIAA0100Q14667 2235 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 TYW5A2RUC4 315 aaKnown RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 DLX3O60479 287 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 CXCL14O95715 111 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 HSPA4LO95757 839 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 FGBP02675 491 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 ADH1AP07327 375 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 PDHA1P08559 390 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 GJA1P17302 382 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 CES1P23141 567 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 SLC12A2P55011 1212 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 PFKPQ01813 784 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.566e-7■□□□□ 9
RAB5C-208ENST00000551338 TYSND1Q2T9J0 566 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 LIPMQ5VYY2 423 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 FAM45BPQ6NSW5 357 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 HTR3DQ70Z44 454 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 TREML1Q86YW5 311 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 TTC30BQ8N4P2 665 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 ZNF781Q8N8C0 355 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 MAB21L3Q8N8X9 362 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 LPCAT1Q8NF37 534 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 MDGA1Q8NFP4 955 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 FAM45AQ8TCE6 357 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 HEXDCQ8WVB3 486 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 TMA16Q96EY4 203 aaKnown RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 TSPAN17Q96FV3 270 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 CDKN2AIPNLQ96HQ2 116 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 NSL1Q96IY1 281 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 FEM1AQ9BSK4 669 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 UNKQ9C0B0 810 aaKnown RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 CDH19Q9H159 772 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 CXXC1Q9P0U4 656 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 CFAP97Q9P2B7 532 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 SH3BP1Q9Y3L3 701 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 MTF2Q9Y483 593 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 ARIH1Q9Y4X5 557 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-208ENST00000551338 RAI2Q9Y5P3 530 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
RAB5C-208ENST00000551338 C2orf16Q68DN1 1984 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 A0A1W2PRU2 124 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 LCHNA4D1U4 455 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 A8MUI8 341 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CAPN14A8MX76 684 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CD3EAPO15446 510 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 GLP2RO95838 553 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CKMP06732 381 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 SERPINA6P08185 405 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 PRSS56P0CW18 603 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 MYL4P12829 197 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 FDXRP22570 491 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 MPSTP25325 297 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 PTPN4P29074 926 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CDC25CP30307 473 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CCR10P46092 362 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 KPNA2P52292 529 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CDKN2DP55273 166 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 ERVFC1P60507 584 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 RHOAP61586 193 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 RCN2Q14257 317 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CSHL1Q14406 222 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TAF1AQ15573 450 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 INO80DQ53TQ3 878 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TMEM240Q5SV17 173 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 ZNF549Q6P9A3 640 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TMEM207Q6UWW9 146 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TMC7Q7Z402 723 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 GLT6D1Q7Z4J2 308 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 MFN1Q8IWA4 741 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 SPATA6LQ8N4H0 392 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TDRD5Q8NAT2 981 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TXNDC5Q8NBS9 432 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 SH3RF2Q8TEC5 729 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 SLC22A17Q8WUG5 538 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 SREK1Q8WXA9 508 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 BADQ92934 168 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 RMDN1Q96DB5 314 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 MIPEPQ99797 713 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CCDC106Q9BWC9 280 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 DRC3Q9H069 523 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 MRPL46Q9H2W6 279 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 FAM96AQ9H5X1 160 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 TLE6Q9H808 572 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 ACSS2Q9NR19 701 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms