RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TMEM248Q9NWD8 314 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SEMA5BQ9P283 1151 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 UPB1Q9UBR1 384 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 IPO11Q9UI26 975 aaKnown RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 FBXO4Q9UKT5 387 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 TSC22D4Q9Y3Q8 395 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 CNOT1A5YKK6 2376 aaKnown RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 POLR3AO14802 1390 aaPredicted RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ABCC11Q96J66 1382 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 EMSYQ7Z589 1322 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 TSPY2A6NKD2 308 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 BTBD19C9JJ37 291 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 DNTTP04053 509 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 HNRNPCP07910 306 aaKnown RBP eCLIP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 TSPY3P0CV98 308 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 TSPY8P0CW00 308 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 IRF1P10914 325 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ZNF8P17098 575 aaPredicted RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 MPLP40238 635 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 PBX3P40426 434 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 PTPN9P43378 593 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 CYP2J2P51589 502 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 OLR1P78380 273 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 TSPY1Q01534 308 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 CYP4A11Q02928 519 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 PRPF4BQ13523 1007 aaKnown RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 FRG1Q14331 258 aaKnown RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 LARS2Q15031 903 aaKnown RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 LSM12Q3MHD2 195 aaKnown RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 DPCR1Q3MIW9 517 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 SPECC1Q5M775 1068 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 TSTD2Q5T7W7 516 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ZKSCAN2Q63HK3 967 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ATG9BQ674R7 924 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 NCEH1Q6PIU2 408 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 PRSS45Q7RTY3 260 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 MDGA2Q7Z553 956 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 KAT2BQ92831 832 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 FAM149B1Q96BN6 582 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ZNF347Q96SE7 839 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ERVK-5Q9HDB9 667 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 PLSCR4Q9NRQ2 329 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
CPSF6-206ENST00000550987 SH3BP4Q9P0V3 963 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 HDAC6Q9UBN7 1215 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 ANKRD31Q8N7Z5 1873 aa5.59□□□□□ -1.51
CPSF6-206ENST00000550987 PIEZO2Q9H5I5 2752 aa5.59□□□□□ -1.52
CPSF6-206ENST00000550987 NBEAQ8NFP9 2946 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 ANKRD50Q9ULJ7 1429 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 CARMIL3Q8ND23 1372 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 H0YIN7 160 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 UBE2Q2LH0YL09 131 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 SNAP23O00161 211 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 NFATC1O95644 943 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 CLTBP09497 229 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 CCL5P13501 91 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 DRD4P21917 467 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 TTKP33981 857 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 PSMB10P40306 273 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 CLK3P49761 638 aaKnown RBP5.58□□□□□ -1.52
CPSF6-206ENST00000550987 GNAQP50148 359 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 EPS8Q12929 822 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 STK4Q13043 487 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 MTA1Q13330 715 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 FOXE3Q13461 319 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 BECN1Q14457 450 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 TAF11Q15544 211 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 FAM171A1Q5VUB5 890 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 ARMC3Q5W041 872 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 GPR139Q6DWJ6 353 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 C17orf99Q6UX52 265 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 MOB3CQ70IA8 216 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 GRASPQ7Z6J2 395 aaPredicted RBP5.58□□□□□ -1.52
CPSF6-206ENST00000550987 GPAT4Q86UL3 456 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 FAM160B2Q86V87 743 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 RHPN2Q8IUC4 686 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 FAM47BQ8NA70 645 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 PIGKQ92643 395 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 PERPQ96FX8 193 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 NCAPGQ9BPX3 1015 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 SNTG1Q9NSN8 517 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 C20orf141Q9NUB4 165 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 ASIC5Q9NY37 505 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 KIAA1456Q9P272 454 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 NFKBIL1Q9UBC1 381 aaPredicted RBP5.58□□□□□ -1.52
CPSF6-206ENST00000550987 PCDHGB5Q9Y5G0 923 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 KALRNO60229 2985 aa5.58□□□□□ -1.52
CPSF6-206ENST00000550987 TAF4O00268 1085 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 BCAT2O15382 392 aaPredicted RBP5.57□□□□□ -1.52
CPSF6-206ENST00000550987 MSI1O43347 362 aaKnown RBP5.57□□□□□ -1.52
CPSF6-206ENST00000550987 GJB3O75712 270 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 JTBO76095 146 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 ADAP00813 363 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 SERPINC1P01008 464 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 TUBB4AP04350 444 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 APOA4P06727 396 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 SLC2A4P14672 509 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 ZNF20P17024 532 aa5.57□□□□□ -1.52
CPSF6-206ENST00000550987 ATF7P17544 494 aaPredicted RBP5.57□□□□□ -1.52
CPSF6-206ENST00000550987 ACSL1P33121 698 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms