RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 UBA7P41226 1012 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 NXPH1P58417 271 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 LILRA4P59901 499 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 NKX6-1P78426 367 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 KRT17Q04695 432 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 ZCWPW2Q504Y3 356 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 TMEM31Q5JXX7 168 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 STXBP5Q5T5C0 1151 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 LMBRD2Q68DH5 695 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 PARM1Q6UWI2 310 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 PPP1R32Q7Z5V6 425 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 CBWD2Q8IUF1 395 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 MAML2Q8IZL2 1156 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 HDAC7Q8WUI4 952 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 SAAL1Q96ER3 474 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC43Q96MW1 224 aaKnown RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 RAB34Q9BZG1 259 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 TRIM6Q9C030 488 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 AMBRA1Q9C0C7 1298 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 SIK2Q9H0K1 926 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 TNMDQ9H2S6 317 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-214ENST00000550893 ZDHHC7Q9NXF8 308 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 DUSP12Q9UNI6 340 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 ANKRD6Q9Y2G4 727 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 KIF3AQ9Y496 699 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 INSL5Q9Y5Q6 135 aa5.2□□□□□ -1.58
SCAF11-214ENST00000550893 ZZEF1O43149 2961 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 MYO18AQ92614 2054 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 TP53BP1Q12888 1972 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 AKAP13Q12802 2813 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 FSD2A1L4K1 749 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 MTMR11A4FU01 709 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 GOLGA8IPA6NC78 632 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 ANTXRLA6NF34 631 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 GOLGA8JA6NMD2 632 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 H3BUI4 141 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 M0QYG6 137 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 SYN3O14994 580 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 TRIAP1O43715 76 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 B3GAT3O94766 335 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 VNN1O95497 513 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 RHOP08100 348 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 LAMP2P13473 410 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 PFKFB1P16118 471 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 KLRC2P26717 231 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 MTHFRP42898 656 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 NHLH1Q02575 133 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 SIGLEC14Q08ET2 396 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 STK4Q13043 487 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 BOP1Q14137 746 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC157Q569K6 752 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 DCLRE1AQ6PJP8 1040 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 GRASPQ7Z6J2 395 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 TCEAL8Q8IYN2 117 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 MYCT1Q8N699 235 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 ENGASEQ8NFI3 743 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 SMG7Q92540 1137 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 FGF13Q92913 245 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 DHX58Q96C10 678 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 HVCN1Q96D96 273 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 P2RY11Q96G91 374 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 CALML4Q96GE6 196 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 UROC1Q96N76 676 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 NECTIN4Q96NY8 510 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 OSBPL9Q96SU4 736 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 TIMP4Q99727 224 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 ADPGKQ9BRR6 497 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 MSTO1Q9BUK6 570 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 DDX23Q9BUQ8 820 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 COLEC11Q9BWP8 271 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 C1QTNF1Q9BXJ1 281 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 TPSD1Q9BZJ3 242 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 SDCBP2Q9H190 292 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 BLZF1Q9H2G9 400 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 ZSCAN16Q9H4T2 348 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 UPF2Q9HAU5 1272 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 AGPAT3Q9NRZ7 376 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 KLC4Q9NSK0 619 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 DMAC2Q9NW81 257 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 DDX56Q9NY93 547 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 LARSQ9P2J5 1176 aaKnown RBP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 SEL1LQ9UBV2 794 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 L1RE1Q9UN81 338 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 C2CD2Q9Y426 696 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 YIPF1Q9Y548 306 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCAF11-214ENST00000550893 ENTPD2Q9Y5L3 495 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 ZFHX4Q86UP3 3567 aa5.19□□□□□ -1.58
SCAF11-214ENST00000550893 NCOR2Q9Y618 2525 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 A0A1B0GVL5 298 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 LINC00473A8K010 186 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 POLR2DO15514 142 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CLDN3O15551 220 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 TADA2AO75478 443 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PRAMEF12O95522 483 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PDGFRBP09619 1106 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 TDGF1P13385 188 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 HMGA1P17096 107 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms