RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CES1P23141 567 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 DGKAP23743 735 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 CDKN2BP42772 138 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 DYNLT1P63172 113 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 IFI35P80217 286 aaPredicted RBP17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 TFDP2Q14188 446 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 PTK2BQ14289 1009 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 TAZQ16635 292 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 WSCD2Q2TBF2 565 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 LIPIQ6XZB0 460 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 SPOCD1Q6ZMY3 1216 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 MACC1Q6ZN28 852 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 USP45Q70EL2 814 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 KATNAL2Q8IYT4 538 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 SPC24Q8NBT2 197 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 TPCN2Q8NHX9 752 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 ADAMTS14Q8WXS8 1223 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 CNDP2Q96KP4 475 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 OLFM3Q96PB7 478 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 LGMNQ99538 433 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 SCNM1Q9BWG6 230 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 MBNL1Q9NR56 388 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 TOR4AQ9NXH8 423 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 B4GALT6Q9UBX8 382 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 PHTF1Q9UMS5 762 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 REXO2Q9Y3B8 237 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 NEUROG3Q9Y4Z2 214 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 RAI2Q9Y5P3 530 aa17.31■□□□□ 0.36
CHMP1A-208ENST00000550102 USP24Q9UPU5 2620 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 RCCD1A6NED2 376 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 GOLGA8CPA6NN73 597 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 BTNL10A8MVZ5 291 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 KCNK1O00180 336 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 ENC1O14682 589 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 TOP3BO95985 862 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 CSF2P04141 144 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 KRT10P13645 584 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 SPINK2P20155 84 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 VIPR1P32241 457 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 MARCKSL1P49006 195 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 VAV2P52735 878 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 DSC2Q02487 901 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 MTM1Q13496 603 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 ZNF542PQ5EBM4 170 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 TFDP3Q5H9I0 405 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 TPRG1LQ5T0D9 272 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 KIAA1328Q86T90 577 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 SLCO6A1Q86UG4 719 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 TMEM139Q8IV31 216 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 TXLNBQ8N3L3 684 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 PNPLA1Q8N8W4 532 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 ACRBPQ8NEB7 543 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 ZNF548Q8NEK5 533 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 LRRN4Q8WUT4 740 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 RBM41Q96IZ5 413 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 BRD8Q9H0E9 1235 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 UCKL1Q9NWZ5 548 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 SALL4Q9UJQ4 1053 aa17.3■□□□□ 0.36
CHMP1A-208ENST00000550102 FFAR2O15552 330 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 RECQL5O94762 991 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 DKK1O94907 266 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 PCCBP05166 539 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 ALPPL2P10696 532 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 CYP2A6P11509 494 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 NAP1L1P55209 391 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 AP1B1Q10567 949 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 ACOX1Q15067 660 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 CNGA3Q16281 694 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 NPNTQ6UXI9 565 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 CCDC50Q8IVM0 306 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 NDUFAF2Q8N183 169 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 SLC25A45Q8N413 288 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 CHCHD4Q8N4Q1 142 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 OR4C6Q8NH72 309 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 CNTNAP3BQ96NU0 1288 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 MCCC1Q96RQ3 725 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 IL12RB2Q99665 862 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 CNTNAP3Q9BZ76 1288 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 KLK13Q9UKR3 277 aa17.29■□□□□ 0.36
CHMP1A-208ENST00000550102 PLXNB3Q9ULL4 1909 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 NEMP2A6NFY4 417 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 NPIPB15A6NHN6 443 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 A8MX80 341 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 CST8O60676 142 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 HEXIM1O94992 359 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 ZRANB2O95218 330 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 JCHAINP01591 159 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 JUNDP17535 347 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 TGM2P21980 687 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 HTR1BP28222 390 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 CTNNA1P35221 906 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 NR2C2P49116 596 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 PEX5P50542 639 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 EPHB1P54762 984 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 ZBTB17Q13105 803 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 EIF2B5Q13144 721 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 NFATC4Q14934 902 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms