RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 EIF2B3Q9NR50 452 aaKnown RBP20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 TLR8Q9NR97 1041 aaKnown RBP20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 PCDHGA1Q9Y5H4 931 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 SNX11Q9Y5W9 270 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 TLDC2A0PJX2 215 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 FGF10O15520 208 aaPredicted RBP20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 LRIG2O94898 1065 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 IGLV3-19P01714 112 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 TYRP14679 529 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 VAV1P15498 845 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 KCNC4Q03721 635 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 PPIDQ08752 370 aaKnown RBP20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 GALNT2Q10471 571 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 CCDC38Q502W7 563 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 ANKRD20A2Q5SQ80 823 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 HECTD3Q5T447 861 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 ANKRD20A1Q5TYW2 823 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 ANKRD20A3Q5VUR7 823 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 ARHGEF18Q6ZSZ5 1173 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 LZTR1Q8N653 840 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 UHMK1Q8TAS1 419 aaKnown RBP20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 CCDC110Q8TBZ0 833 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 HDAC11Q96DB2 347 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 WBP1Q96G27 269 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 MKRN2Q9H000 416 aaKnown RBP20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 PCED1AQ9H1Q7 454 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 ETNK1Q9HBU6 452 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 EURLQ9NYK6 297 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 FTSJ1Q9UET6 329 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 SLC12A6Q9UHW9 1150 aa20.21■□□□□ 0.83
CTDSP2-204ENST00000548823 NEDD8-MDP1E9PL57 170 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 GSTA2P09210 222 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 ZDHHC11BP0C7U3 371 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 CDK4P11802 303 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 CCT8P50990 548 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 COG7P83436 770 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 IFRD2Q12894 506 aaPredicted RBP20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 INAVAQ3KP66 663 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 TAF1BQ53T94 588 aaPredicted RBP20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 B4GALNT4Q76KP1 1039 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 TAOK1Q7L7X3 1001 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 IGSF8Q969P0 613 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 FBXO32Q969P5 355 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 P2RY11Q96G91 374 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 VAT1Q99536 393 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 BBS2Q9BXC9 721 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 CATSPERBQ9H7T0 1116 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 OSER1Q9NX31 292 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 SLC24A2Q9UI40 661 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 DNMT3LQ9UJW3 386 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 ANKRD6Q9Y2G4 727 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 TEX264Q9Y6I9 313 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 STON1Q9Y6Q2 735 aa20.2■□□□□ 0.82
CTDSP2-204ENST00000548823 WASH4PA8MWX3 477 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 PAGE1O75459 146 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MAP3K6O95382 1288 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MLNP12872 115 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 EPHB2P29323 1055 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MDH1P40925 334 aaKnown RBP20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MAGEA3P43357 314 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 DGKGP49619 791 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 PGFP49763 221 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 TUBP50607 506 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 SARNPP82979 210 aaKnown RBP20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 TLE3Q04726 772 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 FASTKD3Q14CZ7 662 aaKnown RBP20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 TEAD4Q15561 434 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 LONRF1Q17RB8 773 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 PARP6Q2NL67 630 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MSS51Q4VC12 460 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 SNX30Q5VWJ9 437 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 TMPRSS6Q8IU80 811 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 CCDC13Q8IYE1 715 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 FGF11Q92914 225 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 WBP2Q969T9 261 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 TBC1D31Q96DN5 1066 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 SIPA1Q96FS4 1042 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 LGMNQ99538 433 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 XAB2Q9HCS7 855 aaKnown RBP20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 MARK1Q9P0L2 795 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 SFMBT1Q9UHJ3 866 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 NEU3Q9UQ49 428 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 ACTL7BQ9Y614 415 aa20.19■□□□□ 0.82
CTDSP2-204ENST00000548823 GOLGA8MH3BSY2 632 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 METTL18O95568 372 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 CISD3P0C7P0 127 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 MMP13P45452 471 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 IRAK1P51617 712 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 GPX6P59796 221 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 CXADRP78310 365 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 AP1B1Q10567 949 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 TRIP4Q15650 581 aaPredicted RBP20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 BBS9Q3SYG4 887 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 DNAJC21Q5F1R6 531 aaKnown RBP20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 HTR3DQ70Z44 454 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 LRRC49Q8IUZ0 686 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 CENPTQ96BT3 561 aa20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 FCRL2Q96LA5 508 aaPredicted RBP20.18■□□□□ 0.82
CTDSP2-204ENST00000548823 TSGA13Q96PP4 275 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms