RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 NCKIPSDQ9NZQ3 722 aa15.3■□□□□ 0.04
SNX29P1-201ENST00000548357 KLQ9UEF7 1012 aa15.3■□□□□ 0.04
SNX29P1-201ENST00000548357 ATXN7L1Q9ULK2 861 aaPredicted RBP15.3■□□□□ 0.04
SNX29P1-201ENST00000548357 GPR34Q9UPC5 381 aa15.3■□□□□ 0.04
SNX29P1-201ENST00000548357 PCDHGA8Q9Y5G5 932 aa15.3■□□□□ 0.04
SNX29P1-201ENST00000548357 CCDC187A0A096LP49 1063 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 A0A0U1RQS6 177 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 LRRC53A6NM62 1247 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 D6RAR5 112 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 ERVH48-1M5A8F1 160 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 DFFAO00273 331 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 TRAFD1O14545 582 aaPredicted RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 EFSO43281 561 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 NOBOXO60393 691 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 RECQL5O94762 991 aaPredicted RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 RPLP0P05388 317 aaKnown RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 FERP16591 822 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 RBMS1P29558 406 aaKnown RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 MIPP30301 263 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 PEX5P50542 639 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 AIF1P55008 147 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 CFHR1Q03591 330 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 ESRP1Q6NXG1 681 aaKnown RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 RFX8Q6ZV50 586 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 CLEC14AQ86T13 490 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 PGBD5Q8N414 524 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 FSTL5Q8N475 847 aaPredicted RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 GPR156Q8NFN8 814 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 WDR36Q8NI36 951 aaKnown RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 HCAR2Q8TDS4 363 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 ZNF641Q96N77 438 aaPredicted RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 RBM15Q96T37 977 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 TMEM168Q9H0V1 697 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 EPB41L5Q9HCM4 733 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 ANO10Q9NW15 660 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 CWC15Q9P013 229 aaKnown RBP15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 DOLKQ9UPQ8 538 aa15.29■□□□□ 0.04
SNX29P1-201ENST00000548357 ANKRD62A6NC57 917 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TMEM191CA6NGB0 347 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 ARHGAP42A6NI28 874 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 DDX3XO00571 662 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TOR1BO14657 336 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 PALMO75781 387 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 PEX11BO96011 259 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 FUCA1P04066 466 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 CTSEP14091 401 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TNFAIP3P21580 790 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 IL1R2P27930 398 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 ETV5P41161 510 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 RPIAP49247 311 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 VAC14Q08AM6 782 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 SLC10A7Q0GE19 358 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 MTM1Q13496 603 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 DPYSQ14117 519 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 ELOCQ15369 112 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TGIF1Q15583 401 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 PPP6R3Q5H9R7 873 aaPredicted RBP15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 ERMARDQ5T6L9 678 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 BROXQ5VW32 411 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TXNRD3NBQ6F5E7 133 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 ERAP2Q6P179 960 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 BRAT1Q6PJG6 821 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 SASS6Q6UVJ0 657 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 Q8N9G6 341 aaPredicted RBP15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 LSM14AQ8ND56 463 aaKnown RBP15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TPCN2Q8NHX9 752 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 GLMNQ92990 594 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 SMIM14Q96QK8 99 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 TUBGCP5Q96RT8 1024 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 CINPQ9BW66 212 aaPredicted RBP15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 DPH1Q9BZG8 443 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 HAUS4Q9H6D7 363 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
SNX29P1-201ENST00000548357 K7ENP7 123 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 LRCH4O75427 683 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 ALPIP09923 528 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 ITIH1P19827 911 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 CDK11BP21127 795 aaKnown RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 UGT1A5P35504 534 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 CSNK1DP48730 415 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 SUOXP51687 545 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 KIAA1024LP59773 190 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 SMTNL2Q2TAL5 461 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 TAF1BQ53T94 588 aaPredicted RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 DPPA4Q7L190 304 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 SNRNP27Q8WVK2 155 aaKnown RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 LIN37Q96GY3 246 aaPredicted RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 GFM1Q96RP9 751 aaKnown RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 LRRN3Q9H3W5 708 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 ATP13A3Q9H7F0 1226 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 SUDS3Q9H7L9 328 aaPredicted RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 SP110Q9HB58 689 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 ST14Q9Y5Y6 855 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 RNF215Q9Y6U7 377 aa15.27■□□□□ 0.04
SNX29P1-201ENST00000548357 ZNF106Q9H2Y7 1883 aaKnown RBP15.27■□□□□ 0.03
SNX29P1-201ENST00000548357 TLN1Q9Y490 2541 aaKnown RBP15.26■□□□□ 0.03
SNX29P1-201ENST00000548357 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms