RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 A0A1W2PQJ5 194 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 PMS2P1A4D2B8 440 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 TMEM202A6NGA9 273 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 H3BRJ5 948 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
CPSF6-204ENST00000547486 MAFKO60675 156 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 FAM228BP0C875 321 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 CR2P20023 1033 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 IL4RP24394 825 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 LSSP48449 732 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 ZNF135P52742 658 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-204ENST00000547486 GABREP78334 506 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 LRRC69Q6ZNQ3 347 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 LZTR1Q8N653 840 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 SYN2Q92777 582 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-204ENST00000547486 ATXN7L3BQ96GX2 97 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 PRR11Q96HE9 360 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-204ENST00000547486 HIC2Q96JB3 615 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 NOD2Q9HC29 1040 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 SIRPGQ9P1W8 387 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 SEPT3Q9UH03 358 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 ENTPD2Q9Y5L3 495 aa13.41□□□□□ -0.26
CPSF6-204ENST00000547486 BZW2Q9Y6E2 419 aaKnown RBP13.41□□□□□ -0.26
CPSF6-204ENST00000547486 ASXL3Q9C0F0 2248 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 HTRA2O43464 458 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 RASGRP1O95267 797 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 CYP1A2P05177 515 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 CTSEP14091 401 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 HTR1BP28222 390 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 ARL4AP40617 200 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 RPIAP49247 311 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 BLKP51451 505 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 UBASH3AP57075 661 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 AP1S1P61966 158 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 SLC25A11Q02978 314 aaKnown RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 TLE3Q04726 772 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 MTM1Q13496 603 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 PIGHQ14442 188 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 PTPRRQ15256 657 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 ELOCQ15369 112 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 TMCO4Q5TGY1 634 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 LVRNQ6Q4G3 990 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 TMCO3Q6UWJ1 677 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 DPPA4Q7L190 304 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 CPNE8Q86YQ8 564 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 SFTPA2Q8IWL1 248 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 SPACA3Q8IXA5 215 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 CBARPQ8N350 705 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 FSTL5Q8N475 847 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 KYQ8NBH2 561 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 PCDH19Q8TAB3 1148 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 OR1E3Q8WZA6 343 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 GLMNQ92990 594 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 PDXPQ96GD0 296 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 WDR92Q96MX6 357 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 ZNF578Q96N58 590 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 ZNF599Q96NL3 588 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 CCDC3Q9BQI4 270 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 LGR4Q9BXB1 951 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 ASCL3Q9NQ33 180 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 MRPL40Q9NQ50 206 aaKnown RBP13.4□□□□□ -0.26
CPSF6-204ENST00000547486 B4GALT6Q9UBX8 382 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 KLQ9UEF7 1012 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 CAPN11Q9UMQ6 739 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 SATB2Q9UPW6 733 aa13.4□□□□□ -0.26
CPSF6-204ENST00000547486 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
CPSF6-204ENST00000547486 IGSF10Q6WRI0 2623 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 SERPING1P05155 500 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 CD48P09326 243 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ALPIP09923 528 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ELFN1P0C7U0 828 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 TRIM23P36406 574 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 RENBPP51606 427 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 PDX1P52945 283 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 MAXP61244 160 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ZBED6P86452 979 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
CPSF6-204ENST00000547486 PNCKQ6P2M8 343 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 RBM44Q6ZP01 1051 aaKnown RBP13.39□□□□□ -0.27
CPSF6-204ENST00000547486 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ARL10Q8N8L6 244 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 OR56A4Q8NGH8 313 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 TPCN2Q8NHX9 752 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 TEKT4Q8WW24 435 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 NAT6Q93015 286 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 COQ10AQ96MF6 247 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 SLC46A1Q96NT5 459 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms