RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 GABRR2P28476 465 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 PTDSS1P48651 473 aaKnown RBP12.77□□□□□ -0.36
SCAF11-209ENST00000547018 SEMA3AQ14563 771 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 VEPH1Q14D04 833 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 TMCO4Q5TGY1 634 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.36
SCAF11-209ENST00000547018 BBS5Q8N3I7 341 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 PAWRQ96IZ0 340 aaKnown RBP12.77□□□□□ -0.36
SCAF11-209ENST00000547018 RNPEPL1Q9HAU8 725 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 AGO1Q9UL18 857 aaKnown RBP12.77□□□□□ -0.36
SCAF11-209ENST00000547018 YIPF1Q9Y548 306 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 AK5Q9Y6K8 562 aa12.77□□□□□ -0.36
SCAF11-209ENST00000547018 GPC4O75487 556 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 STC2O76061 302 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 URODP06132 367 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 SERPINA6P08185 405 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 SBK3P0C264 359 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 CHRM3P20309 590 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 RPL14P50914 215 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 NDST2P52849 883 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 PLIN5Q00G26 463 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 EIF4EBP2Q13542 120 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 PPP1R3AQ16821 1122 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 LIPMQ5VYY2 423 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 ULK2Q8IYT8 1036 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 C1orf74Q96LT6 269 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 OLA1Q9NTK5 396 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 GREB1Q4ZG55 1949 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 NDUFS3O75489 264 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 SKIV2L2P42285 1042 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 APLP1P51693 650 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF135P52742 658 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 RHOAP61586 193 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 MSANTD2Q6P1R3 559 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 CAMK1DQ8IU85 385 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 DDIASQ8IXT1 998 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 HS6ST3Q8IZP7 471 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 WFDC5Q8TCV5 224 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 PRICKLE1Q96MT3 831 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 TSEN34Q9BSV6 310 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 MRPL46Q9H2W6 279 aaKnown RBP12.77□□□□□ -0.37
SCAF11-209ENST00000547018 TNFRSF12AQ9NP84 129 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 CCDC167Q9P0B6 97 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 SLC7A8Q9UHI5 535 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 PCDHB12Q9Y5F1 795 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 CPQQ9Y646 472 aa12.77□□□□□ -0.37
SCAF11-209ENST00000547018 UBXN8O00124 270 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 SRP72O76094 671 aaKnown RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 CASP2P42575 452 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 MAGEA11P43364 429 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 KLC3Q6P597 504 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 CYS1Q717R9 158 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 PCDH20Q8N6Y1 951 aaKnown RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 DPF3Q92784 378 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 CORO1BQ9BR76 489 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 FBRSL1Q9HCM7 1045 aaKnown RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 FKBPLQ9UIM3 349 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 A0A1W2PRU2 124 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 INSIG1O15503 277 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 SUPT3HO75486 399 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 CRCPO75575 148 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 RAG1P15918 1043 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 NAB1Q13506 487 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 PTPRNQ16849 979 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 ARMC12Q5T9G4 340 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 TMPRSS6Q8IU80 811 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 CILP2Q8IUL8 1156 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 NSUN5Q96P11 429 aaKnown RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 NPAS2Q99743 824 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 CCDC106Q9BWC9 280 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 SEMA4BQ9NPR2 832 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-209ENST00000547018 BTRCQ9Y297 605 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 C15orf41Q9Y2V0 281 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 RAI2Q9Y5P3 530 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
SCAF11-209ENST00000547018 TBX10O75333 385 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 TPBGLP0DKB5 382 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ITGB8P26012 769 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 IL10RBQ08334 325 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 MMEL1Q495T6 779 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 RABGAP1LQ5R372 815 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 SKA2Q8WVK7 121 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 GPR63Q9BZJ6 419 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms