RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 ITIH2P19823 946 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 MAT2AP31153 395 aaKnown RBP13.83□□□□□ -0.2
PTCH1-213ENST00000546820 VIPR1P32241 457 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 HOXD12P35452 270 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 LMAN1P49257 510 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 FNTAP49354 379 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 IHHQ14623 411 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 LRRC73Q5JTD7 316 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 FAM182AQ5T1J6 154 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 IPMKQ8NFU5 416 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 CEP76Q8TAP6 659 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 ASB12Q8WXK4 309 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 PIGKQ92643 395 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 SKA1Q96BD8 255 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 OXNAD1Q96HP4 312 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-213ENST00000546820 MIR1-1HGQ9H1L0 117 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 SMARCAL1Q9NZC9 954 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 NCDNQ9UBB6 729 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 RAPGEFL1Q9UHV5 662 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 EIF2B4Q9UI10 523 aaKnown RBP13.83□□□□□ -0.2
PTCH1-213ENST00000546820 CACNA1HO95180 2353 aa13.83□□□□□ -0.2
PTCH1-213ENST00000546820 IGLON5A6NGN9 336 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 F5H423 210 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 PRAMEF26H0Y7S4 382 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 SLC31A1O15431 190 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 URI1O94763 535 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 EPN2O95208 641 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 PRKCGP05129 697 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 IGHV4-34P06331 123 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ELFN1P0C7U0 828 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ZNF30P17039 623 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 CTPS1P17812 591 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 HLA-DPA1P20036 260 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ITPKAP23677 461 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 MAOBP27338 520 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 HNF1BP35680 557 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 MMP12P39900 470 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 LIG3P49916 1009 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 STAT4Q14765 748 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 QPCTQ16769 361 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ZNF284Q2VY69 593 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 TMEM259Q4ZIN3 620 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 KDELC1Q6UW63 502 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 LINC00523Q86TU6 105 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 CCHCR1Q8TD31 782 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 SERAC1Q96JX3 654 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 MCCC1Q96RQ3 725 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 WRAP53Q9BUR4 548 aaKnown RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ARRDC1-AS1Q9H2J1 176 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 LRRC40Q9H9A6 602 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ETNK1Q9HBU6 452 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 MAGEE1Q9HCI5 957 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 B4GALT6Q9UBX8 382 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 PILRBQ9UKJ0 227 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ZFR2Q9UPR6 939 aaKnown RBP13.82□□□□□ -0.2
PTCH1-213ENST00000546820 ITM2BQ9Y287 266 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 NUMA1Q14980 2115 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
PTCH1-213ENST00000546820 SPAG17Q6Q759 2223 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 CAPN8A6NHC0 703 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 A8MX80 341 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 PSMD11O00231 422 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 FANCGO15287 622 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 METTL18O95568 372 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 ECEL1O95672 775 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 PAK4O96013 591 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-213ENST00000546820 KRT14P02533 472 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 ETS1P14921 441 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 AKT2P31751 481 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 RPL22P35268 128 aaKnown RBP13.81□□□□□ -0.2
PTCH1-213ENST00000546820 PPP2CBP62714 309 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 RACK1P63244 317 aaKnown RBP13.81□□□□□ -0.2
PTCH1-213ENST00000546820 PPP2CAP67775 309 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 CKAP4Q07065 602 aaKnown RBP13.81□□□□□ -0.2
PTCH1-213ENST00000546820 GALNT3Q14435 633 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 TEAD4Q15561 434 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 SLC1A5Q15758 541 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 DUOXA1Q1HG43 343 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 SEL1L3Q68CR1 1132 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 LIPIQ6XZB0 460 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 FAM174AQ8TBP5 190 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 RUBCNQ92622 972 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 KLK6Q92876 244 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 MRGPRX2Q96LB1 330 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 LENG8Q96PV6 779 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-213ENST00000546820 TRIB3Q96RU7 358 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 LYSMD1Q96S90 227 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 RAB6BQ9NRW1 208 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 HACD3Q9P035 362 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 GGT7Q9UJ14 662 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 CDC23Q9UJX2 597 aa13.81□□□□□ -0.2
PTCH1-213ENST00000546820 NPIPB15A6NHN6 443 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms