RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 BTN2A3PQ96KV6 586 aa15.74■□□□□ 0.11
CUX1-211ENST00000546411 TMEM209Q96SK2 561 aa15.74■□□□□ 0.11
CUX1-211ENST00000546411 SLC13A4Q9UKG4 626 aa15.74■□□□□ 0.11
CUX1-211ENST00000546411 C1orf232A0A0U1RR37 186 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 STX16-NPEPL1H3BU86 382 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 TBL1XO60907 577 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 HLA-DQB2P05538 268 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 NEDD8Q15843 81 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 ZFP1Q6P2D0 407 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 FAM151BQ6UXP7 276 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 GPRIN1Q7Z2K8 1008 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 TAGAPQ8N103 731 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 GFM2Q969S9 779 aaKnown RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 CXCL16Q9H2A7 254 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 CYLDQ9NQC7 956 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 AZIN1O14977 448 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 IRAK2O43187 625 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 AHSGP02765 367 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 HNRNPCP07910 306 aaKnown RBP eCLIP15.73■□□□□ 0.117e-7■■□□□ 13.7
CUX1-211ENST00000546411 PRKCHP24723 683 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 SOAT1P35610 550 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 FOLH1Q04609 750 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 PRKCZQ05513 592 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 PPP1R15BQ5SWA1 713 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 PQLC1Q8N2U9 271 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 DBF4BQ8NFT6 615 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 FBXO30Q8TB52 745 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 MAGEE2Q8TD90 523 aaPredicted RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 DENND1AQ8TEH3 1009 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 SPAG4Q9NPE6 437 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 J3KR12 359 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 STAU1O95793 577 aaKnown RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 FKBP1BP68106 108 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 NRG1Q02297 640 aaPredicted RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 PPIDQ08752 370 aaKnown RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 VAC14Q08AM6 782 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 CRHR2Q13324 411 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 MOGSQ13724 837 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 MAGEC3Q8TD91 643 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 MED8Q96G25 268 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 ARL15Q9NXU5 204 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 POMPQ9Y244 141 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 PIRO00625 290 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 RAD51BO15315 384 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 WFS1O76024 890 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 ABCB1P08183 1280 aaPredicted RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 PROZP22891 400 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 MC4RP32245 332 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 NEK3P51956 506 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 RPS24P62847 133 aaKnown RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 PRSS55Q6UWB4 352 aaPredicted RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 FAM120BQ96EK7 910 aaKnown RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 LINGO1Q96FE5 620 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 CIB1Q99828 191 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 STN1Q9H668 368 aaKnown RBP15.73■□□□□ 0.11
CUX1-211ENST00000546411 POLG2Q9UHN1 485 aa15.73■□□□□ 0.11
CUX1-211ENST00000546411 TIPRLO75663 272 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 ALDOAP04075 364 aaKnown RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 ZBTB48P10074 688 aaPredicted RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 PTPRCAPQ14761 206 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 CPSF6Q16630 551 aaKnown RBP eCLIP15.72■□□□□ 0.11
CUX1-211ENST00000546411 HERC6Q8IVU3 1022 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 MPP4Q96JB8 637 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 UROC1Q96N76 676 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 PCDHB8Q9UN66 801 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 LTBP3Q9NS15 1303 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 GNG14A0A1W2PPG7 69 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 C1RP00736 705 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 INHBEP58166 350 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 GHRHRQ02643 423 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 VPS26BQ4G0F5 336 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 CLYBLQ8N0X4 340 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 RTL3Q8N8U3 475 aaKnown RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 RMND5BQ96G75 393 aaPredicted RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 GDAP2Q9NXN4 497 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 PPM1HQ9ULR3 514 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 RAD54BQ9Y620 910 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 AP4B1Q9Y6B7 739 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 FAM149AA5PLN7 773 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 TMEM247A6NEH6 219 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 MAGEC1O60732 1142 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 SIX3O95343 332 aaPredicted RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 LPOP22079 712 aaPredicted RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 SLC18A1P54219 525 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 DMC1Q14565 340 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 FRMD7Q6ZUT3 714 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 CENPLQ8N0S6 344 aaPredicted RBP15.72■□□□□ 0.11
CUX1-211ENST00000546411 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 GPR21Q99679 349 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 SLC25A51Q9H1U9 297 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 RHBDL2Q9NX52 303 aa15.72■□□□□ 0.11
CUX1-211ENST00000546411 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.11
CUX1-211ENST00000546411 MYH9P35579 1960 aaKnown RBP15.71■□□□□ 0.11
CUX1-211ENST00000546411 E7ESA3 106 aa15.71■□□□□ 0.11
CUX1-211ENST00000546411 UBXN8O00124 270 aa15.71■□□□□ 0.11
CUX1-211ENST00000546411 LDLRP01130 860 aa15.71■□□□□ 0.11
CUX1-211ENST00000546411 GRB14Q14449 540 aa15.71■□□□□ 0.11
CUX1-211ENST00000546411 STARD3Q14849 445 aa15.71■□□□□ 0.11
CUX1-211ENST00000546411 MTX3Q5HYI7 312 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms