RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 ELF2Q15723 593 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 HIF1AQ16665 826 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 FNBP1LQ5T0N5 605 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 ERN2Q76MJ5 926 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 PDIK1LQ8N165 341 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 NDUFAF2Q8N183 169 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 AADATQ8N5Z0 425 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 PAF1Q8N7H5 531 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■■■■■ 64.2
PPP1CA-211ENST00000546202 ATOH1Q92858 354 aaPredicted RBP16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 SIPA1Q96FS4 1042 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 SCRN2Q96FV2 425 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 PWWP2AQ96N64 755 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 LYSMD1Q96S90 227 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 PARD6BQ9BYG5 372 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 SLC6A17Q9H1V8 727 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 DYRK4Q9NR20 520 aa16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 PIH1D1Q9NWS0 290 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-211ENST00000546202 LRRK1Q38SD2 2015 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 CAPN8A6NHC0 703 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 EIF3HO15372 352 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 PAPSS2O95340 614 aaPredicted RBP16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 DNTTP04053 509 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 MYBL2P10244 700 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 TPH1P17752 444 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 NEK3P51956 506 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 CNTN1Q12860 1018 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 MSS51Q4VC12 460 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 CERCAMQ5T4B2 595 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 PIP5KL1Q5T9C9 394 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 ARMC3Q5W041 872 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 USP45Q70EL2 814 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 AGGF1Q8N302 714 aaeCLIP16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 TSTD1Q8NFU3 115 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 SIGLEC10Q96LC7 697 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 SMIM14Q96QK8 99 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 SRPK1Q96SB4 655 aaKnown RBP16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 FMO2Q99518 471 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 IL22Q9GZX6 179 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 MAGEE1Q9HCI5 957 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 BFARQ9NZS9 450 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 HACD3Q9P035 362 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 SPO11Q9Y5K1 396 aa16.36■□□□□ 0.21
PPP1CA-211ENST00000546202 PLXND1Q9Y4D7 1925 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 H0Y858 1186 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 PLK4O00444 970 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 AREL1O15033 823 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 SPINT1O43278 529 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 ALPIP09923 528 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 ADRB3P13945 408 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 CTPS1P17812 591 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 NFKBIAP25963 317 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 MGAT1P26572 445 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 HNF1BP35680 557 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 P2RY2P41231 377 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 ABL2P42684 1182 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 SESN2P58004 480 aaPredicted RBP16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 DHX9Q08211 1270 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 PTPRRQ15256 657 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 DNAJC21Q5F1R6 531 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 AGBL4Q5VU57 503 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 FBXL19Q6PCT2 694 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 USP30Q70CQ3 517 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 CENPUQ71F23 418 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 TTC7BQ86TV6 843 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 RASSF3Q86WH2 238 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 CACUL1Q86Y37 369 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 HDDC3Q8N4P3 179 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 HMGB4Q8WW32 186 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 RAB7BQ96AH8 199 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 LRRC39Q96DD0 335 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 HHIPQ96QV1 700 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 RANBP9Q96S59 729 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 TSPYL1Q9H0U9 437 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 TRABDQ9H4I3 376 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 PCDH12Q9NPG4 1184 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 SERGEFQ9UGK8 458 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 ZNF106Q9H2Y7 1883 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 CACNA1HO95180 2353 aa16.35■□□□□ 0.21
PPP1CA-211ENST00000546202 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 A0A1W2PP55 124 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 NPIPB15A6NHN6 443 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 SDR42E2A6NKP2 422 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 SLC7A4O43246 635 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 ALDH1A2O94788 518 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 APBB3O95704 486 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 IGLV3-19P01714 112 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 PRKCGP05129 697 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 PIRTP0C851 137 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 MMP12P39900 470 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 CXCL12P48061 93 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 CCR3P51677 355 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 FOXK2Q01167 660 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 CCDC15Q0P6D6 951 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 SFSWAPQ12872 951 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 MTM1Q13496 603 aa16.34■□□□□ 0.21
PPP1CA-211ENST00000546202 CDKN3Q16667 212 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms