RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MAGEB5Q9BZ81 275 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 TTYH3Q9C0H2 523 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 SCAND2PQ9GZW5 306 aaPredicted RBP9.45□□□□□ -0.9
CHD4-212ENST00000545083 RAB6CQ9H0N0 254 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 CYP4F12Q9HCS2 524 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 PCDH12Q9NPG4 1184 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 PLCB1Q9NQ66 1216 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 SLC39A1Q9NY26 324 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 RRN3Q9NYV6 651 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 DKK3Q9UBP4 350 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 STAP1Q9ULZ2 295 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 PCDHGC3Q9UN70 934 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 HIVEP3Q5T1R4 2406 aa9.45□□□□□ -0.9
CHD4-212ENST00000545083 MED13Q9UHV7 2174 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 PRRC2CQ9Y520 2896 aaKnown RBP9.44□□□□□ -0.9
CHD4-212ENST00000545083 EFCAB7A8K855 629 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FAM72CH0Y354 149 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 KRT38O76015 456 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 ECEL1O95672 775 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 F9P00740 461 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 PDGFAP04085 211 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 PRKCGP05129 697 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FGF1P05230 155 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 CD44P16070 742 aaKnown RBP9.44□□□□□ -0.9
CHD4-212ENST00000545083 FLT3P36888 993 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 USP8P40818 1118 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 LIG3P49916 1009 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 TRA2AQ13595 282 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHD4-212ENST00000545083 CLPPQ16740 277 aaPredicted RBP9.44□□□□□ -0.9
CHD4-212ENST00000545083 SLC25A52Q3SY17 297 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FAM72AQ5TYM5 149 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 MANEALQ5VSG8 457 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FAM72DQ6L9T8 149 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 BNIPLQ7Z465 357 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 NLRP14Q86W24 1093 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FAM72BQ86X60 149 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FAM131BQ86XD5 332 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 ZSWIM9Q86XI8 627 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 FAM129CQ86XR2 697 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 TRIM59Q8IWR1 403 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 NLGN4XQ8N0W4 816 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 BMPERQ8N8U9 685 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 TEX19Q8NA77 164 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 NLGN4YQ8NFZ3 816 aaPredicted RBP9.44□□□□□ -0.9
CHD4-212ENST00000545083 OR4D9Q8NGE8 314 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 ATL2Q8NHH9 583 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 STARD8Q92502 1023 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 RTP4Q96DX8 246 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 HMCESQ96FZ2 354 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 GDAP1L1Q96MZ0 367 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 HAPLN3Q96S86 360 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 CTRCQ99895 268 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 ASPSCR1Q9BZE9 553 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 KLC2Q9H0B6 622 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 PPARGC1AQ9UBK2 798 aaKnown RBP9.44□□□□□ -0.9
CHD4-212ENST00000545083 DNAI1Q9UI46 699 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 NEU3Q9UQ49 428 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 MFHAS1Q9Y4C4 1052 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 ST14Q9Y5Y6 855 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 MRPS18BQ9Y676 258 aaKnown RBP9.44□□□□□ -0.9
CHD4-212ENST00000545083 KCNMB2Q9Y691 235 aa9.44□□□□□ -0.9
CHD4-212ENST00000545083 ESPL1Q14674 2120 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 ANKRD36A6QL64 1941 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 IGHV1OR21-1A0A087WYE8 117 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 TSPAN11A1L157 253 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 RHPN2P1A8MT19 583 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 B4E171 279 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 CACNB4O00305 520 aaPredicted RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 PPM1DO15297 605 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 FUCA1P04066 466 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 CCNB1P14635 433 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 GM2AP17900 193 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 BMP6P22004 513 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 XPAP23025 273 aaPredicted RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 F8A1P23610 371 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 AK4P27144 223 aaPredicted RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 CSTF2P33240 577 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHD4-212ENST00000545083 MMP12P39900 470 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 DCTP40126 519 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 TSPAN7P41732 249 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 GEMIN4P57678 1058 aaKnown RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 ELP6Q0PNE2 266 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 SEPT6Q14141 434 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 UGP2Q16851 508 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 TCTN3Q6NUS6 607 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 TTI2Q6NXR4 508 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 NRSN1Q8IZ57 195 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 GALNT11Q8NCW6 608 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 CCDC112Q8NEF3 446 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 KIAA1524Q8TCG1 905 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 ZDHHC1Q8WTX9 485 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 PTCD2Q8WV60 388 aaKnown RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 EXOC2Q96KP1 924 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 SYNCQ9H7C4 482 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 SUDS3Q9H7L9 328 aaPredicted RBP9.43□□□□□ -0.9
CHD4-212ENST00000545083 APMAPQ9HDC9 416 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms