RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RECQL5O94762 991 aaPredicted RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 OTCP00480 354 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 UGT2B4P06133 528 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 ZNF10P21506 573 aaPredicted RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 LILRA4P59901 499 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 DLG2Q15700 870 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 NOL9Q5SY16 702 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 SPESP1Q6UW49 350 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 C2orf73Q8N5S3 287 aaPredicted RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 CPT1BQ92523 772 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 SKA1Q96BD8 255 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 MPP4Q96JB8 637 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 PSME2Q9UL46 239 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 POLR1DQ9Y2S0 133 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 TPRKBQ9Y3C4 175 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 GUCY1B2O75343 617 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 ADHFE1Q8IWW8 467 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 SPAG4Q9NPE6 437 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 PIPSLA2A3N6 862 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 ARL5CA6NH57 179 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 TALDO1P37837 337 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 DSC2Q02487 901 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 TRIM25Q14258 630 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 TTC27Q6P3X3 843 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 RBFAQ8N0V3 343 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 OR10G6Q8NH81 332 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 PHACTR1Q9C0D0 580 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 KIAA1522Q9P206 1035 aaPredicted RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 NPEPPSL1A6NEC2 478 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 NDUFS2O75306 463 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 CLDN11O75508 207 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 ICAM3P32942 547 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHD4-211ENST00000544484 PPM1JQ5JR12 505 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 AMIGO2Q86SJ2 522 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 POMGNT2Q8NAT1 580 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
CHD4-211ENST00000544484 COPG2Q9UBF2 871 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 SORCS3Q9UPU3 1222 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 MYO5BQ9ULV0 1848 aa12.84□□□□□ -0.35
CHD4-211ENST00000544484 STBD1O95210 358 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 MPSTP25325 297 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 JAM2P57087 298 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 NRG1Q02297 640 aaPredicted RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 QPCTQ16769 361 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 GSTA3Q16772 222 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 PLA2G4EQ3MJ16 856 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 ANKRD22Q5VYY1 191 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 CLHC1Q8NHS4 586 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 CERS4Q9HA82 394 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 TMEM216Q9P0N5 145 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 WRAP73Q9P2S5 460 aaPredicted RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 STXBP5LQ9Y2K9 1186 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 MYL12AP19105 171 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 ATXN1P54253 815 aaKnown RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 AIF1P55008 147 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 PRKG2Q13237 762 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 FBXW8Q8N3Y1 598 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 SVOPQ8N4V2 548 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 UBE2E3Q969T4 207 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 FERD3LQ96RJ6 166 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 CIDEBQ9UHD4 219 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 CARNS1A5YM72 827 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 MYL12BO14950 172 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 BIRC5O15392 142 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 SLC35G4P0C7Q5 338 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 ITPKAP23677 461 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 CXCR2P25025 360 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 ATP6V0D1P61421 351 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 ARHGAP8P85298 464 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 ATP1A4Q13733 1029 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 CLYBLQ8N0X4 340 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 PANX1Q96RD7 426 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 OSBPL6Q9BZF3 934 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 SLC9A8Q9Y2E8 581 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 TSC22D4Q9Y3Q8 395 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 GSAPA4D1B5 854 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 TRIM24O15164 1050 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 LRIG2O94898 1065 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 TOMM20Q15388 145 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 ARHGAP36Q6ZRI8 547 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 SAPCD2Q86UD0 394 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 PARGQ86W56 976 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 IQCKQ8N0W5 287 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 DCBLD1Q8N8Z6 715 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms