RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 DLX3O60479 287 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 F11P03951 625 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 LTA4HP09960 611 aaKnown RBP17.13■□□□□ 0.33
PTPRO-209ENST00000543886 ITGB8P26012 769 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 NAGLUP54802 743 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 ARHGAP8P85298 464 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 VWA5B1Q5TIE3 1220 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 AGR3Q8TD06 166 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 COG4Q9H9E3 785 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 MKI67P46013 3256 aaKnown RBP17.13■□□□□ 0.33
PTPRO-209ENST00000543886 CCDC162PA2VCL2 907 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 GSC2O15499 205 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CHRNGP07510 517 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 SPATA31D3P0C874 917 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 ACRP10323 421 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 EZRP15311 586 aaKnown RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 RAG1P15918 1043 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 AOC1P19801 751 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CR2P20023 1033 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CCND1P24385 295 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CPA2P48052 419 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 HK2P52789 917 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 KDSRQ06136 332 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 PTPRCAPQ14761 206 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TXNDC8Q6A555 127 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 FAM45BPQ6NSW5 357 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 SPATA31D4Q6ZUB0 917 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TMC7Q7Z402 723 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 ARL14EPQ8N8R7 260 aaPredicted RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 OR13C4Q8NGS5 318 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 GPR150Q8NGU9 434 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 FAM45AQ8TCE6 357 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 AGAP11Q8TF27 550 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 PAWRQ96IZ0 340 aaKnown RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TDRD1Q9BXT4 1180 aaKnown RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CATSPERZQ9NTU4 200 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TAS2R1Q9NYW7 299 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 MCM8Q9UJA3 840 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 RPL26L1Q9UNX3 145 aaKnown RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 KIAA1671Q9BY89 1806 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TRIM43BA6NCK2 446 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 B2RBV5 119 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 PIGNO95427 931 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CCDC166P0CW27 439 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 HDCP19113 662 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 MPSTP25325 297 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 ARF5P84085 180 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 PRKAA1Q13131 559 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 EPGNQ6UW88 154 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 GLT6D1Q7Z4J2 308 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 SDCCAG8Q86SQ7 713 aaPredicted RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 ARHGAP24Q8N264 748 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TMEM199Q8N511 208 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TTC16Q8NEE8 873 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 TRIM43Q96BQ3 446 aaPredicted RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 ACSS2Q9NR19 701 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CORO1CQ9ULV4 474 aaPredicted RBP17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CRYL1Q9Y2S2 319 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 CPQQ9Y646 472 aa17.12■□□□□ 0.33
PTPRO-209ENST00000543886 OBSL1O75147 1896 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 TMCC1O94876 653 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 HOXB8P17481 243 aaPredicted RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 OGNP20774 298 aaKnown RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 ATP5F1P24539 256 aaPredicted RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 CDH18Q13634 790 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 TECRLQ5HYJ1 363 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 WASHC2DQ5SRD0 308 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 LINGO4Q6UY18 593 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 CCNYL1Q8N7R7 359 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 LPCAT1Q8NF37 534 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 OR4L1Q8NH43 312 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 ADGRE3Q9BY15 652 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 POMKQ9H5K3 350 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 IL21Q9HBE4 155 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 VPS28Q9UK41 221 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 ASB3Q9Y575 518 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 SPO11Q9Y5K1 396 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 RAI2Q9Y5P3 530 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 SNAP91O60641 907 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 FGF18O76093 207 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 BAIAP3O94812 1187 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 LUC7L3O95232 432 aaKnown RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 SLC4A1P02730 911 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 RBP1P09455 135 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 NCF2P19878 526 aaPredicted RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 PMLP29590 882 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 ZNF140P52738 457 aaPredicted RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 CDKN2DP55273 166 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 MXRA7P84157 204 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 TAF1AQ15573 450 aaPredicted RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 SEL1L3Q68CR1 1132 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms