RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 SNX32Q86XE0 403 aa16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 TSPAN17Q96FV3 270 aa16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 MAELQ96JY0 434 aaKnown RBP16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 CATSPER2Q96P56 530 aa16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 POLR1EQ9GZS1 481 aaKnown RBP16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 PAPOLBQ9NRJ5 636 aaKnown RBP16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 LRCH1Q9Y2L9 728 aa16.17■□□□□ 0.18
SCNN1A-221ENST00000543768 EIF4E1BA6NMX2 242 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 A8MT66 165 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 HNRNPLP14866 589 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 ATF6P18850 670 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 ADSLP30566 484 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 RPS6KA3P51812 740 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 CDKN2DP55273 166 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 PRAMEP78395 509 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 SH2D4BQ5SQS7 431 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 RNF111Q6ZNA4 994 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 ADGRG6Q86SQ4 1221 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 CFAP52Q8N1V2 620 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 RP9Q8TA86 221 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 SH3RF2Q8TEC5 729 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 PYDC1Q8WXC3 89 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 CCDC124Q96CT7 223 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 TBATAQ96M53 351 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 SUDS3Q9H7L9 328 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 NDE1Q9NXR1 346 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 A0A0D9SEW6 157 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 AIM2O14862 343 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 IPO13O94829 963 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 BAG2O95816 211 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 GALTP07902 379 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 PDHA1P08559 390 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 SLC6A4P31645 630 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 ROR2Q01974 943 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 ACAP2Q15057 778 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 TCTN1Q2MV58 587 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 C5orf22Q49AR2 442 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 TCHHL1Q5QJ38 904 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 NXNQ6DKJ4 435 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 LGI2Q8N0V4 545 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 ZNF184Q99676 751 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 CYP4F12Q9HCS2 524 aa16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 MTF2Q9Y483 593 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-221ENST00000543768 SLC38A8A6NNN8 435 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 SDHDO14521 159 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 SMIM24O75264 130 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 RBP1P09455 135 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 HOXD10P28358 340 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 SULT2A1Q06520 285 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 PTPRCAPQ14761 206 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 ZRSR2Q15696 482 aaKnown RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 RPS27LQ71UM5 84 aaKnown RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 CRIPAKQ8N1N5 446 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 OR52K2Q8NGK3 314 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 RAET1EQ8TD07 263 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 CCDC126Q96EE4 140 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 FEM1CQ96JP0 617 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 ZBTB26Q9HCK0 441 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 TNFRSF12AQ9NP84 129 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 ARL5AQ9Y689 179 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 BUD23O43709 281 aaKnown RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 EPOP01588 193 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 HLA-DPA1P20036 260 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 SP100P23497 879 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 HOXD9P28356 352 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 KCNC1P48547 511 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 NUDT2P50583 147 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 KPNA1P52294 538 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 NOGQ13253 232 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 CYLC2Q14093 348 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 BTG3Q14201 252 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 ZNF235Q14590 738 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 ALG1LQ6GMV1 187 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 KLC3Q6P597 504 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 PRSS55Q6UWB4 352 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 SLC26A7Q8TE54 656 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 PXYLP1Q8TE99 480 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 BCL7CQ8WUZ0 217 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 JADE3Q92613 823 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 IFT43Q96FT9 208 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 MARK4Q96L34 752 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 CRYL1Q9Y2S2 319 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 ACTL7AQ9Y615 435 aa16.15■□□□□ 0.18
SCNN1A-221ENST00000543768 F5H5T6 163 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 H7C4K7 107 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 FGF1P05230 155 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 PLK1P53350 603 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 KLC1Q07866 573 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 GALNT3Q14435 633 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 GPR158Q5T848 1215 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 DSELQ8IZU8 1212 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 KYQ8NBH2 561 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 BLOC1S5Q8TDH9 187 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 PEX13Q92968 403 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 DNAJC1Q96KC8 554 aaKnown RBP16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 TTPALQ9BTX7 342 aa16.14■□□□□ 0.17
SCNN1A-221ENST00000543768 GTSE1Q9NYZ3 720 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms