RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 LENG8Q96PV6 779 aaPredicted RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 OR1F2PQ96R84 312 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 SMOQ99835 787 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 UGT2A1Q9Y4X1 527 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 GMPPBQ9Y5P6 360 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PSAT1Q9Y617 370 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 LCHNA4D1U4 455 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 CIB2O75838 187 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 PCDH8O95206 1070 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 ADH1AP07327 375 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 F8A1P23610 371 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 NR2F2P24468 414 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 UQCRC1P31930 480 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 FXR2P51116 673 aaKnown RBP eCLIP8.93□□□□□ -0.983e-10■■□□□ 12.2
VPS13D-212ENST00000543766 MBTPS1Q14703 1052 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TM4SF20Q53R12 229 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 BEX5Q5H9J7 111 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 LIN9Q5TKA1 542 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 PIK3R6Q5UE93 754 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 KLHDC10Q6PID8 442 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SPATC1Q76KD6 591 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.93□□□□□ -0.982e-6■■■■■ 34.8
VPS13D-212ENST00000543766 SELENOHQ8IZQ5 122 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 DSELQ8IZU8 1212 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 CPEB3Q8NE35 698 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 OR4D6Q8NGJ1 314 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SLC26A7Q8TE54 656 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TMEM40Q8WWA1 233 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TRIB2Q92519 343 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 USP7Q93009 1102 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 NT5C1BQ96P26 610 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 QKIQ96PU8 341 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SLC4A5Q9BY07 1137 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SLC2A11Q9BYW1 496 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TXLNGYQ9BZA5 131 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 ISCUQ9H1K1 167 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TRIT1Q9H3H1 467 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 PNPLA8Q9NP80 782 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 DNAJC17Q9NVM6 304 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SNX24Q9Y343 169 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 HYOU1Q9Y4L1 999 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 V9GYQ6 96 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 CPDO75976 1380 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 NUP188Q5SRE5 1749 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SPAG6O75602 509 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 KCNK5O95279 499 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 F9P00740 461 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 HNRNPLP14866 589 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 CSKP41240 450 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 HUNKP57058 714 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SLC14A1Q13336 389 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 ITGA9Q13797 1035 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 ATF7IP2Q5U623 682 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 LYPD8Q6UX82 237 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 RANBP10Q6VN20 620 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 USP51Q70EK9 711 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 LRRC8DQ7L1W4 858 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 IRF2BP1Q8IU81 584 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 GRAMD1CQ8IYS0 662 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TAGAPQ8N103 731 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 S100PBPQ96BU1 408 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TLR10Q9BXR5 811 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 RAB17Q9H0T7 212 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 AGO3Q9H9G7 860 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 NPHS2Q9NP85 383 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 RNF14Q9UBS8 474 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 ENPP5Q9UJA9 477 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 FOXE1O00358 373 aaPredicted RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 KPNA4O00629 521 aaPredicted RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 ATXN7O15265 892 aaPredicted RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 PJA2O43164 708 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 HSPA12AO43301 675 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SLITRK5O94991 958 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 TGM6O95932 706 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 MMP8P22894 467 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 GTF2H1P32780 548 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 MPIP34949 423 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 GABRB2P47870 512 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 HNRNPFP52597 415 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 RAB15P59190 212 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 YWHAHQ04917 246 aaPredicted RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 BTN1A1Q13410 526 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 GRB7Q14451 532 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 AMHR2Q16671 573 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 EPC2Q52LR7 807 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 PAN3Q58A45 887 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 DENND2CQ68D51 928 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
VPS13D-212ENST00000543766 C16orf62Q7Z3J2 963 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 FAM131BQ86XD5 332 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 SFR1Q86XK3 245 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 BBS10Q8TAM1 723 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 HTR3CQ8WXA8 447 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 GJA10Q969M2 543 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 MYD88Q99836 296 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 LRRC4CQ9HCJ2 640 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 PCDHB16Q9NRJ7 776 aa8.93□□□□□ -0.98
VPS13D-212ENST00000543766 RWDD2AQ9UIY3 292 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms