RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 IMPDH1P20839 514 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 MYF6P23409 242 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 TTKP33981 857 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 ATXN3P54252 364 aaPredicted RBP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 ADARP55265 1226 aaKnown RBP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 NME5P56597 212 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 C1QTNF8P60827 252 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 ATP6V0D1P61421 351 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 FOXM1Q08050 763 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 TMEM62Q0P6H9 643 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 CSHL1Q14406 222 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 INPP5AQ14642 412 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 SPRYD7Q5W111 196 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 RANBP10Q6VN20 620 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 ZBTB49Q6ZSB9 765 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 LARP4Q71RC2 724 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 GPRIN1Q7Z2K8 1008 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 TAC4Q86UU9 113 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 TFAP2CQ92754 450 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 FATE1Q969F0 183 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 CELF6Q96J87 481 aaKnown RBP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 GPATCH1Q9BRR8 931 aaKnown RBP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 GSTO2Q9H4Y5 243 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 TBCCD1Q9NVR7 557 aa13.8□□□□□ -0.2
VPS33A-208ENST00000543633 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
VPS33A-208ENST00000543633 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.79□□□□□ -0.2
VPS33A-208ENST00000543633 MAFKO60675 156 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 F2P00734 622 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 USP17L7P0C7H9 530 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 HNRNPLP14866 589 aaKnown RBP eCLIP13.79□□□□□ -0.23e-7■□□□□ 11.2
VPS33A-208ENST00000543633 SMPD1P17405 629 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 ESRRGP62508 458 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 MANEALQ5VSG8 457 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 OLFML2BQ68BL8 750 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 IQSEC1Q6DN90 963 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 LCN8Q6JVE9 175 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 COLGALT2Q8IYK4 626 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
VPS33A-208ENST00000543633 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 PCED1BQ96HM7 432 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 SEMA6AQ9H2E6 1030 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 IRAK4Q9NWZ3 460 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 CCDC167Q9P0B6 97 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 SLC45A1Q9Y2W3 748 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 TRAF6Q9Y4K3 522 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 MIA3Q5JRA6 1907 aa13.79□□□□□ -0.2
VPS33A-208ENST00000543633 CCDC78A2IDD5 438 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 PTGESO14684 152 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 MT-CYBP00156 380 aaPredicted RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 FCGR1AP12314 374 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 PCSK1P29120 753 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 RAB15P59190 212 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 RALGDSQ12967 914 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 EIF4EBP2Q13542 120 aaPredicted RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 AFMIDQ63HM1 303 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 MINDY1Q8N5J2 469 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 FEM1CQ96JP0 617 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 SLC29A1Q99808 456 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CIB1Q99828 191 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 C9orf16Q9BUW7 83 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CAAP1Q9H8G2 361 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 SLC2A6Q9UGQ3 507 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CDH7Q9ULB5 785 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 NYNRINQ9P2P1 1898 aaKnown RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 NEMP2A6NFY4 417 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 DFFAO00273 331 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CSPG5O95196 566 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 MATN4O95460 622 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 GPX3P22352 226 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 SLC7A2P52569 658 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 ADAM17P78536 824 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 PRKCQQ04759 706 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 IRF5Q13568 498 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CCL15Q16663 113 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 ZBED5Q49AG3 693 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 RBM20Q5T481 1227 aaKnown RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 RWDD4Q6NW29 188 aaKnown RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 MYO1HQ8N1T3 1032 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 DQX1Q8TE96 717 aaKnown RBP13.78□□□□□ -0.2
VPS33A-208ENST00000543633 C19orf60Q96EN9 201 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 OLFM1Q99784 485 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 ATP13A1Q9HD20 1204 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 RNF19AQ9NV58 838 aa13.78□□□□□ -0.2
VPS33A-208ENST00000543633 OSER1Q9NX31 292 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms