RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 RBM15Q96T37 977 aaKnown RBP eCLIP17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 DHX35Q9H5Z1 703 aaKnown RBP17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 SP110Q9HB58 689 aa17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 GPATCH2LQ9NWQ4 482 aa17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 SSUH2Q9Y2M2 353 aa17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 DGKBQ9Y6T7 804 aa17.52■□□□□ 0.4
PPP1CA-210ENST00000542876 FLNBO75369 2602 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 CFAP46Q8IYW2 2715 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 J3QKU1 62 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 DFFAO00273 331 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 PRKCGP05129 697 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 JMJD7P0C870 316 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 TNFAIP3P21580 790 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 CCL7P80098 99 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 CLN3Q13286 438 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 LY6DQ14210 128 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 RFTN1Q14699 578 aaPredicted RBP17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 ERMARDQ5T6L9 678 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 TAF8Q7Z7C8 310 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 B3GNT8Q7Z7M8 397 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 OR56A4Q8NGH8 313 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 PDXPQ96GD0 296 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 CCNL2Q96S94 520 aaPredicted RBP17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 FOXP3Q9BZS1 431 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 SLC39A8Q9C0K1 460 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 LRRN3Q9H3W5 708 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 LMBRD1Q9NUN5 540 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 RABGEF1Q9UJ41 708 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 PCDHGA7Q9Y5G6 932 aa17.51■□□□□ 0.39
PPP1CA-210ENST00000542876 PDE2AO00408 941 aaPredicted RBP17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 RNF8O76064 485 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 RECQL5O94762 991 aaPredicted RBP17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 GLB1P16278 677 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 UGT1A5P35504 534 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 KIAA1024LP59773 190 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 ZSWIM9Q86XI8 627 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 CCNJLQ8IV13 435 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 Q8N9G6 341 aaPredicted RBP17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 PLA2G15Q8NCC3 412 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 FAM46DQ8NEK8 389 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 TTC9Q92623 222 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 PCSK1NQ9UHG2 260 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 MOSPD1Q9UJG1 213 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 RP1P56715 2156 aa17.5■□□□□ 0.39
PPP1CA-210ENST00000542876 A0A1W2PQM1 296 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 LRRC10BA6NIK2 292 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 TMCO5BA8MYB1 307 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 PRPSAP2O60256 369 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 SLC5A2P31639 672 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 CCKBRP32239 447 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 RGRP47804 291 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 RENBPP51606 427 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 OGDHQ02218 1023 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 NSUN2Q08J23 767 aaKnown RBP eCLIP17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 MAMLD1Q13495 774 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 ARHGEF7Q14155 803 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 STX1AQ16623 288 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 PPP6R3Q5H9R7 873 aaPredicted RBP17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 KIAA1614Q5VZ46 1190 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 LIPIQ6XZB0 460 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 RBM43Q6ZSC3 357 aaKnown RBP17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 GPR156Q8NFN8 814 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 OR1E3Q8WZA6 343 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 FUBP1Q96AE4 644 aaKnown RBP17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 DPEP2Q9H4A9 486 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 WDR26Q9H7D7 661 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 APPL1Q9UKG1 709 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 ATXN7L1Q9ULK2 861 aaPredicted RBP17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 ATMQ13315 3056 aa17.49■□□□□ 0.39
PPP1CA-210ENST00000542876 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 TNFRSF10CO14798 259 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 HOXC4P09017 264 aaPredicted RBP17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 PNLIPP16233 465 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 ERCC2P18074 760 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 NFKBIAP25963 317 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 SCNN1BP51168 640 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 ZNF135P52742 658 aaPredicted RBP17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 AP1S1P61966 158 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 IL10RBQ08334 325 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 ACOX1Q15067 660 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 CA9Q16790 459 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 TSR1Q2NL82 804 aaKnown RBP17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 CERCAMQ5T4B2 595 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 CLEC17AQ6ZS10 378 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 DPPA4Q7L190 304 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 TMEM159Q96B96 161 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 ECHDC3Q96DC8 303 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 MED8Q96G25 268 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 KCTD15Q96SI1 283 aaPredicted RBP17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 SNRNP25Q9BV90 132 aaKnown RBP17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 CYP4F12Q9HCS2 524 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 FGF22Q9HCT0 170 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 PISDQ9UG56 409 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 SEPT3Q9UH03 358 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 LOXL2Q9Y4K0 774 aa17.48■□□□□ 0.39
PPP1CA-210ENST00000542876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.47■□□□□ 0.39
PPP1CA-210ENST00000542876 A8MX80 341 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms