RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	GSTO2	Q9H4Y5	243 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	MRM3	Q9HC36	420 aa	Known RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	ENTPD7	Q9NQZ7	604 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	TMEM30A	Q9NV96	361 aa		12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	TUBA8	Q9NY65	449 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX11-223	ENST00000542838	FAM149A	A5PLN7	773 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	UBFD1	O14562	309 aa	Known RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	TPST1	O60507	370 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	SUPT7L	O94864	414 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ZBED5	Q49AG3	693 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF554	Q86TJ5	538 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	RETREG3	Q86VR2	466 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	SLC22A9	Q8IVM8	553 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	BBS5	Q8N3I7	341 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	C12orf43	Q96C57	262 aa	Known RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ROPN1L	Q96C74	230 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	PPP1R14B	Q96C90	147 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	CACNG4	Q9UBN1	327 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	EGFL7	Q9UHF1	273 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	MRPL42	Q9Y6G3	142 aa	Known RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ADM5	C9JUS6	153 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	NR5A2	O00482	541 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	GABRD	O14764	452 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	MMP3	P08254	477 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	IREB2	P48200	963 aa	Known RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF33A	Q06730	810 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	GALNT1	Q10472	559 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	C16orf72	Q14CZ0	275 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	TAC4	Q86UU9	113 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	GPR180	Q86V85	440 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	SPPL2C	Q8IUH8	684 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	PACRGL	Q8N7B6	248 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	PNPLA1	Q8N8W4	532 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	MFSD2A	Q8NA29	543 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ARRDC4	Q8NCT1	418 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ZUFSP	Q96AP4	578 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	PCED1B	Q96HM7	432 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	C3orf30	Q96M34	536 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	ADI1	Q9BV57	179 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	SPON1	Q9HCB6	807 aa		12.98	□□□□□ -0.33
DDX11-223	ENST00000542838	RNF103-CHMP3	A0A140T963	221 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	DHRS12	A0PJE2	317 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MYBPHL	A2RUH7	354 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	RRN3P2	A6NIE6	340 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	NME4	O00746	187 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	DLGAP1	O14490	977 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ZSCAN9	O15535	394 aa	Predicted RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ALDOC	P09972	364 aa	Known RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	IL10	P22301	178 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MYF6	P23409	242 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ADRA1A	P35348	466 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ACADVL	P49748	655 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ATP4B	P51164	291 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MERTK	Q12866	999 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	INPP5A	Q14642	412 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	PCSK7	Q16549	785 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	XKR4	Q5GH76	650 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	RAB41	Q5JT25	222 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	EPHX4	Q8IUS5	362 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ARHGAP12	Q8IWW6	846 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	TNIP2	Q8NFZ5	429 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ANKRD49	Q8WVL7	239 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	IL12RB2	Q99665	862 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838		A0A0J9YYE9	177 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	HLA-DQB2	P05538	268 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	IMPDH1	P20839	514 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	GPX3	P22352	226 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	AXL	P30530	894 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ETFB	P38117	255 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	CDC42EP1	Q00587	391 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ACAP2	Q15057	778 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	NOMO2	Q5JPE7	1267 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	INTS11	Q5TA45	600 aa	Known RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	CYHR1	Q6ZMK1	362 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	KIAA0408	Q6ZU52	694 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MOB2	Q70IA6	237 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	TMEM40	Q8WWA1	233 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	C19orf60	Q96EN9	201 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	TRIM15	Q9C019	465 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ALG9	Q9H6U8	611 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.97	□□□□□ -0.33	2e-6	■■■■□ 25.8
DDX11-223	ENST00000542838	PTBP2	Q9UKA9	531 aa	Known RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	CDC14A	Q9UNH5	594 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF510	Q9Y2H8	683 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	RBM47	A0AV96	593 aa	Known RBP	12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	UNCX	A6NJT0	531 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MATN3	O15232	486 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	MAFK	O60675	156 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	CLCN5	P51795	746 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	CTBS	Q01459	385 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	ZNF792	Q3KQV3	632 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	UBXN11	Q5T124	520 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	HECTD2	Q5U5R9	776 aa		12.97	□□□□□ -0.33
DDX11-223	ENST00000542838	BHLHA9	Q7RTU4	235 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms