RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 SLC20A1Q8WUM9 679 aa17.93■□□□□ 0.46
CLSTN3-214ENST00000542663 TMEM168Q9H0V1 697 aa17.93■□□□□ 0.46
CLSTN3-214ENST00000542663 SLC25A18Q9H1K4 315 aa17.93■□□□□ 0.46
CLSTN3-214ENST00000542663 SUV39H2Q9H5I1 410 aa17.93■□□□□ 0.46
CLSTN3-214ENST00000542663 DAAM1Q9Y4D1 1078 aa17.93■□□□□ 0.46
CLSTN3-214ENST00000542663 B4DGG1 531 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 B4GAT1O43505 415 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 PRKCGP05129 697 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 MMP8P22894 467 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 CD82P27701 267 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 KIAA1024LP59773 190 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 SERINC3Q13530 473 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 VWA3BQ502W6 1294 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 PHF19Q5T6S3 580 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 OR56A4Q8NGH8 313 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 CCL4L1Q8NHW4 92 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 NTAN1Q96AB6 310 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 SLC12A9Q9BXP2 914 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 B3GNT4Q9C0J1 378 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 RDH14Q9HBH5 336 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 KIAA1468Q9P260 1216 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 NOCTQ9UK39 431 aaKnown RBP17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 PCDHB11Q9Y5F2 797 aa17.92■□□□□ 0.46
CLSTN3-214ENST00000542663 RASA4BC9J798 803 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 F8VZ95 297 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 RASA4O43374 803 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 NUDT21O43809 227 aaKnown RBP17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 CYP1A1P04798 512 aaPredicted RBP17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 CCL4P13236 92 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 UCHL3P15374 230 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 GM2AP17900 193 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 YBEYP58557 167 aaPredicted RBP17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 RALGDSQ12967 914 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 ARHGEF7Q14155 803 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 SPECC1LQ69YQ0 1117 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 DNAAF5Q86Y56 855 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 JPH3Q8WXH2 748 aaPredicted RBP17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 PMEPA1Q969W9 287 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 NCAPGQ9BPX3 1015 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 PDFQ9HBH1 243 aa17.91■□□□□ 0.46
CLSTN3-214ENST00000542663 PRKCSHP14314 528 aaPredicted RBP17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 CHRNB2P17787 502 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 EPHB2P29323 1055 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 MAP9Q49MG5 647 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 EFHC2Q5JST6 749 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 ERAP2Q6P179 960 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 CAMK1DQ8IU85 385 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 PELI3Q8N2H9 469 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 SLC30A5Q8TAD4 765 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 ZNF641Q96N77 438 aaPredicted RBP17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 C11orf70Q9BRQ4 267 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 TUBGCP2Q9BSJ2 902 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 LGR4Q9BXB1 951 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 DPEP2Q9H4A9 486 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 ATP8A1Q9Y2Q0 1164 aa17.9■□□□□ 0.46
CLSTN3-214ENST00000542663 TNFRSF10CO14798 259 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 RECQL5O94762 991 aaPredicted RBP17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 CPNE6O95741 557 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 RFC1P35251 1148 aaPredicted RBP17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 TRIM23P36406 574 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 RGRP47804 291 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 FMO1Q01740 532 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 PTP4A2Q12974 167 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 GRM3Q14832 879 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 CAMK4Q16566 473 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 PARP15Q460N3 678 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 HSP90AA4PQ58FG1 418 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 BRAT1Q6PJG6 821 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 LIPIQ6XZB0 460 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 ZNF438Q7Z4V0 828 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 SLFN11Q7Z7L1 901 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 PIM3Q86V86 326 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 C17orf82Q86X59 251 aaPredicted RBP17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 PTRH1Q86Y79 214 aaKnown RBP17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 LURAP1LQ8IV03 231 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 UMODL1-AS1Q8N2C9 162 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 RCBTB1Q8NDN9 531 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 NKD1Q969G9 470 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 STK33Q9BYT3 514 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 ADNPQ9H2P0 1102 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 CYP4F12Q9HCS2 524 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 SPATS2LQ9NUQ6 558 aaKnown RBP17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 ANKMY1Q9P2S6 941 aa17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.45
CLSTN3-214ENST00000542663 CFAP69A5D8W1 941 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 WASH4PA8MWX3 477 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 STMND1H3BQB6 276 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 J3KR12 359 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 CACNB4O00305 520 aaPredicted RBP17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 HOXC4P09017 264 aaPredicted RBP17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 FGF3P11487 239 aaPredicted RBP17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 MAZP56270 477 aaKnown RBP17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 OR1D5P58170 312 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 CDR2Q01850 454 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 NR1D2Q14995 579 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 TMEM164Q5U3C3 297 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 ZNF677Q86XU0 584 aa17.88■□□□□ 0.45
CLSTN3-214ENST00000542663 NRROSQ86YC3 692 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms