RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SYN1P17600 705 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 LIMK2P53671 638 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 MLLT10P55197 1068 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 NUP107P57740 925 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 GNA12Q03113 381 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 PRKCQQ04759 706 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 PDK2Q15119 407 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 UPP1Q16831 310 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 LRRC26Q2I0M4 334 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 TMEM53Q6P2H8 277 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 DCLRE1AQ6PJP8 1040 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 OLFML1Q6UWY5 402 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 PAQR9Q6ZVX9 377 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 OTOP2Q7RTS6 562 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CROCCP3Q8IVE0 287 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CPSF7Q8N684 471 aaKnown RBP9.19□□□□□ -0.94
THBS3-211ENST00000541990 TTC16Q8NEE8 873 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 OR10T2Q8NGX3 314 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 FAM149B1Q96BN6 582 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 ASB9Q96DX5 294 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 SGF29Q96ES7 293 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 SLC45A3Q96JT2 553 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CSPG4P5Q96PW8 444 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CORO1BQ9BR76 489 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 ZNF670Q9BS34 389 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 NPLQ9BXD5 320 aaPredicted RBP9.19□□□□□ -0.94
THBS3-211ENST00000541990 ANKRD60Q9BZ19 345 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 TRIM8Q9BZR9 551 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 TASP1Q9H6P5 420 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 EFCAB1Q9HAE3 211 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CDYLQ9Y232 598 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 WDR37Q9Y2I8 494 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 RAP2CQ9Y3L5 183 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CHD9Q3L8U1 2897 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 A0A0A0MRY4 1105 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.19□□□□□ -0.94
THBS3-211ENST00000541990 RNF103O00237 685 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 BMP10O95393 424 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CSF2RAP15509 400 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 SELPP16109 830 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 ZNF182P17025 639 aaPredicted RBP9.19□□□□□ -0.94
THBS3-211ENST00000541990 ATP6V1B2P21281 511 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 BDNFP23560 247 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 RHDQ02161 417 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 TRIM25Q14258 630 aaKnown RBP9.19□□□□□ -0.94
THBS3-211ENST00000541990 SCN5AQ14524 2016 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CYP2A13Q16696 494 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 LDLRAP1Q5SW96 308 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 SPRED2Q7Z698 418 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
THBS3-211ENST00000541990 KCTD4Q8WVF5 259 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CANT1Q8WVQ1 401 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 EDEM1Q92611 657 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 THAP11Q96EK4 314 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 PCED1BQ96HM7 432 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 LRCH3Q96II8 777 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 SPATA13Q96N96 652 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CXorf21Q9HAI6 301 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 TBC1D23Q9NUY8 699 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 TBC1D13Q9NVG8 400 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 CNOT11Q9UKZ1 510 aaKnown RBP9.19□□□□□ -0.94
THBS3-211ENST00000541990 SLC39A10Q9ULF5 831 aa9.19□□□□□ -0.94
THBS3-211ENST00000541990 NEMP2A6NFY4 417 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 KCNK1O00180 336 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 GIPC1O14908 333 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 CBFA2T3O75081 653 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 EN2P19622 333 aaPredicted RBP9.18□□□□□ -0.94
THBS3-211ENST00000541990 ATICP31939 592 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 SOX11P35716 441 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 BCAP31P51572 246 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 DPYSQ14117 519 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 RAB39AQ14964 217 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 BOLA3Q53S33 107 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 ZNF280DQ6N043 979 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 SLC39A5Q6ZMH5 540 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 CYS1Q717R9 158 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 BTLAQ7Z6A9 289 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 PIGZQ86VD9 579 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 CBR4Q8N4T8 237 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 B3GALNT2Q8NCR0 500 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 SCAMP5Q8TAC9 235 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 DQX1Q8TE96 717 aaKnown RBP9.18□□□□□ -0.94
THBS3-211ENST00000541990 AUTS2Q8WXX7 1259 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 RSPH1Q8WYR4 309 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 TFAP2CQ92754 450 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 GFM2Q969S9 779 aaKnown RBP9.18□□□□□ -0.94
THBS3-211ENST00000541990 P2RY11Q96G91 374 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 RTP3Q9BQQ7 232 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 GPATCH1Q9BRR8 931 aaKnown RBP9.18□□□□□ -0.94
THBS3-211ENST00000541990 GPR62Q9BZJ7 368 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 DRC3Q9H069 523 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 RMI1Q9H9A7 625 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 TRPC7Q9HCX4 862 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 SQORQ9Y6N5 450 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 TMEM247A6NEH6 219 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
THBS3-211ENST00000541990 C9JVG2 144 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms