RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ZNF669Q96BR6 464 aaPredicted RBP27.97■■■□□ 2.07
CCM2-218ENST00000541586 MYO19Q96H55 970 aa27.97■■■□□ 2.07
CCM2-218ENST00000541586 POLR3BQ9NW08 1133 aaPredicted RBP27.97■■■□□ 2.07
CCM2-218ENST00000541586 BNIP3LO60238 219 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 EPOP01588 193 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 SRCP12931 536 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 ATP5DP30049 168 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 NTSR1P30989 418 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 HPDP32754 393 aaPredicted RBP27.96■■■□□ 2.07
CCM2-218ENST00000541586 SLC20A2Q08357 652 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 DLG2Q15700 870 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 CTAGE3PQ8IX95 158 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 PPM1NQ8N819 430 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 MFSD3Q96ES6 412 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 MTG2Q9H4K7 406 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 STON1Q9Y6Q2 735 aa27.96■■■□□ 2.07
CCM2-218ENST00000541586 CXorf51AA0A1B0GTR3 108 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 ZCWPW2A0A1B0GU75 182 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 FOXO6A8MYZ6 492 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 LRRC6Q86X45 466 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.95■■■□□ 2.07
CCM2-218ENST00000541586 KCNV2Q8TDN2 545 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 TRIB3Q96RU7 358 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 SLC8A2Q9UPR5 921 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 HS3ST2Q9Y278 367 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 FAM169AQ9Y6X4 670 aa27.95■■■□□ 2.07
CCM2-218ENST00000541586 FAM86C2PA6NEL3 165 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 EPHX1P07099 455 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 NMBRP28336 390 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 MSLNQ13421 630 aaPredicted RBP27.95■■■□□ 2.06
CCM2-218ENST00000541586 GAS6Q14393 721 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 TRMT11Q7Z4G4 463 aaKnown RBP27.95■■■□□ 2.06
CCM2-218ENST00000541586 EXOC3L1Q86VI1 746 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 PPHLN1Q8NEY8 458 aaKnown RBP27.95■■■□□ 2.06
CCM2-218ENST00000541586 CLDN23Q96B33 292 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 ZNF778Q96MU6 729 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 PPANQ9NQ55 473 aaKnown RBP27.95■■■□□ 2.06
CCM2-218ENST00000541586 TCAF1Q9Y4C2 921 aa27.95■■■□□ 2.06
CCM2-218ENST00000541586 HLA-DPA1P20036 260 aa27.94■■■□□ 2.06
CCM2-218ENST00000541586 E2F5Q15329 346 aa27.94■■■□□ 2.06
CCM2-218ENST00000541586 ATXN7L2Q5T6C5 722 aaPredicted RBP27.94■■■□□ 2.06
CCM2-218ENST00000541586 NCEH1Q6PIU2 408 aa27.94■■■□□ 2.06
CCM2-218ENST00000541586 METTL3Q86U44 580 aaKnown RBP27.94■■■□□ 2.06
CCM2-218ENST00000541586 PTCD2Q8WV60 388 aaKnown RBP27.94■■■□□ 2.06
CCM2-218ENST00000541586 CERS2Q96G23 380 aa27.94■■■□□ 2.06
CCM2-218ENST00000541586 TNKS2Q9H2K2 1166 aa27.94■■■□□ 2.06
CCM2-218ENST00000541586 IKBKGQ9Y6K9 419 aa27.94■■■□□ 2.06
CCM2-218ENST00000541586 MYLKQ15746 1914 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 ADAM23O75077 832 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 INHBAP08476 426 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 AOC1P19801 751 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 ADRA1DP25100 572 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 FRG1Q14331 258 aaKnown RBP27.93■■■□□ 2.06
CCM2-218ENST00000541586 SLC26A11Q86WA9 606 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 TDRD1Q9BXT4 1180 aaKnown RBP27.93■■■□□ 2.06
CCM2-218ENST00000541586 TM6SF2Q9BZW4 377 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 TMEM245Q9H330 911 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 MRM3Q9HC36 420 aaKnown RBP27.93■■■□□ 2.06
CCM2-218ENST00000541586 IL1RAPL1Q9NZN1 696 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 ADAM21Q9UKJ8 722 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 CHKBQ9Y259 395 aa27.93■■■□□ 2.06
CCM2-218ENST00000541586 CCDC78A2IDD5 438 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 NPC1O15118 1278 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 NDST3O95803 873 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 FGF1P05230 155 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 CHRM1P11229 460 aaPredicted RBP27.92■■■□□ 2.06
CCM2-218ENST00000541586 GALNT3Q14435 633 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 KDM7AQ6ZMT4 941 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 ARIH1Q9Y4X5 557 aaPredicted RBP27.92■■■□□ 2.06
CCM2-218ENST00000541586 PCDHGC4Q9Y5F7 938 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 RAI2Q9Y5P3 530 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 UGT1A9O60656 530 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 ERVK-10P10266 1014 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 PPP2R2AP63151 447 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 MGAT5Q09328 741 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 SEPT6Q14141 434 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 RALGPS1Q5JS13 557 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 ZNF449Q6P9G9 518 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 Q6ZVU0 165 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 SRLQ86TD4 932 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 CDKL2Q92772 493 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 RANBP9Q96S59 729 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 UGT1A7Q9HAW7 530 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 UGT1A10Q9HAW8 530 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 UGT1A8Q9HAW9 530 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 SUN2Q9UH99 717 aa27.92■■■□□ 2.06
CCM2-218ENST00000541586 SYNCRIPO60506 623 aaKnown RBP27.91■■■□□ 2.06
CCM2-218ENST00000541586 ZNF821O75541 412 aaPredicted RBP27.91■■■□□ 2.06
CCM2-218ENST00000541586 FAM155BO75949 473 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 PRLP01236 227 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 HOXB2P14652 356 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 RPS9P46781 194 aaKnown RBP27.91■■■□□ 2.06
CCM2-218ENST00000541586 ATP1A2P50993 1020 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 CLCN5P51795 746 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 SMAD1Q15797 465 aaKnown RBP27.91■■■□□ 2.06
CCM2-218ENST00000541586 EOGTQ5NDL2 527 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 ARMC3Q5W041 872 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 TAOK1Q7L7X3 1001 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 KDM1BQ8NB78 822 aa27.91■■■□□ 2.06
CCM2-218ENST00000541586 FRS2Q8WU20 508 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms