RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 LRIT3Q3SXY7 679 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 HSP90AA5PQ58FG0 334 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 ESRP1Q6NXG1 681 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 ADIPOR2Q86V24 386 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 KCNMB4Q86W47 210 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 PDCD6IPQ8WUM4 868 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 E2F7Q96AV8 911 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 SERAC1Q96JX3 654 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 RIPOR3Q96MK2 946 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 TMEM237Q96Q45 408 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 MYADMQ96S97 322 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 CNOT10Q9H9A5 744 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 SLC2A6Q9UGQ3 507 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 FBXO10Q9UK96 956 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 ANKRD36A6QL64 1941 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 MYLKQ15746 1914 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 hCG_2014768A0A024R1R8 64 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 GOLGA8TH3BQL2 631 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 GOLGA8RI6L899 631 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 MAP3K13O43283 966 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 KRT38O76015 456 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 IGSF6O95976 241 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 KRT4P19013 534 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 PAMP19021 973 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 POLR2EP19388 210 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 DGKGP49619 791 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 TRAF2Q12933 501 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 BMPR2Q13873 1038 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 GRIN2CQ14957 1233 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 PDGFRLQ15198 375 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 CNGA3Q16281 694 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 MBLAC2Q68D91 279 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 PDPK2PQ6A1A2 396 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 SH2D5Q6ZV89 423 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 OR6K2Q8NGY2 324 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 BLOC1S5Q8TDH9 187 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 AGAP2Q99490 1192 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 FAM83CQ9BQN1 747 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 ADGRE3Q9BY15 652 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 TNKS2Q9H2K2 1166 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 TTYH1Q9H313 450 aaPredicted RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 TREX1Q9NSU2 369 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 TXNDC16Q9P2K2 825 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 TRIM49D1C9J1S8 452 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 ZNF821O75541 412 aaPredicted RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 PRLP01236 227 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 PYGLP06737 847 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 CSNK1DP48730 415 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 SERPINB9P50453 376 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 SNRPD1P62314 119 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 GEN1Q17RS7 908 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 VITQ6UXI7 678 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 NLRP9Q7RTR0 991 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 KIAA0907Q7Z7F0 614 aaPredicted RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 RYBPQ8N488 228 aaPredicted RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 LPCAT1Q8NF37 534 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 OR2AP1Q8NGE2 309 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 ATXN2LQ8WWM7 1075 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 ISG20Q96AZ6 181 aaKnown RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 SMC6Q96SB8 1091 aa8.73□□□□□ -1.01
THBS3-210ENST00000541576 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.73□□□□□ -1.01
THBS3-210ENST00000541576 EVLQ9UI08 416 aaPredicted RBP8.73□□□□□ -1.01
THBS3-210ENST00000541576 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 DPPA5A6NC42 116 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 TULP3O75386 442 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 VAPBO95292 243 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 PAPSS2O95340 614 aaPredicted RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 MT-ND3P03897 115 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 PRKCGP05129 697 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 SNRPAP09012 282 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 CISD3P0C7P0 127 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 PIRTP0C851 137 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 NQO1P15559 274 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 ARNTP27540 789 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 MTHFRP42898 656 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 FCHO2Q0JRZ9 810 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 LAMB3Q13751 1172 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 TSTD2Q5T7W7 516 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 TEDDM1Q5T9Z0 273 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 MROH9Q5TGP6 573 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 TMEM215Q68D42 235 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 KIAA0930Q6ICG6 404 aaPredicted RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 C22orf39Q6P5X5 142 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 PACS1Q6VY07 963 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 C12orf40Q86WS4 652 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 MFSD6LQ8IWD5 586 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 YAF2Q8IY57 180 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 BRSK1Q8TDC3 778 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 SMIM14Q96QK8 99 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 CPNE1Q99829 537 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 CEP44Q9C0F1 390 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 IARS2Q9NSE4 1012 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 ETAA1Q9NY74 926 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 SLCO3A1Q9UIG8 710 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 TMEM265A0A087WTH1 108 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 MROH6A6NGR9 719 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 OTOL1A6NHN0 477 aaPredicted RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 ANKRD66B4E2M5 251 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms