RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CYP4F8P98187 520 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ZNF285Q96NJ3 590 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 DNAJC11Q9NVH1 559 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ATP10BO94823 1461 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ZSCAN5BA6NJL1 495 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 MTHFD1P11586 935 aaKnown RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 SCARF1Q14162 830 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 PIH1D1Q9NWS0 290 aaKnown RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 AASSQ9UDR5 926 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ZNRF3Q9ULT6 936 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ASTN2O75129 1339 aaPredicted RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 KANTRA0A1W2PQU2 76 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 CAMTA2O94983 1202 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 FOSL1P15407 271 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 MSR1P21757 451 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 GALK1P51570 392 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 FOLH1Q04609 750 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 CPSF1Q10570 1443 aaKnown RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 CACUL1Q86Y37 369 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 CMTR2Q8IYT2 770 aaKnown RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ACTL9Q8TC94 416 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 NKD1Q969G9 470 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 VAT1Q99536 393 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 MRPS33Q9Y291 106 aaKnown RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 C5orf51A6NDU8 294 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ZNF135P52742 658 aaPredicted RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 SNX33Q8WV41 574 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 METTL8Q9H825 291 aaKnown RBP15.41■□□□□ 0.06
HMGA2-210ENST00000541363 ABCG2Q9UNQ0 655 aa15.41■□□□□ 0.06
HMGA2-210ENST00000541363 FAM228BP0C875 321 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 MC1RQ01726 317 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 FOXR1Q6PIV2 292 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 C16orf86Q6ZW13 317 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 HM13Q8TCT9 377 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 CLIC5Q9NZA1 410 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
HMGA2-210ENST00000541363 TBC1D3BA6NDS4 549 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 RIIAD1A6NNX1 92 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 FSBPO95073 299 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 YBX3P16989 372 aaKnown RBP eCLIP15.4■□□□□ 0.06
HMGA2-210ENST00000541363 CYP11B2P19099 503 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 PCDH19Q8TAB3 1148 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 RNPEPL1Q9HAU8 725 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 CUEDC1Q9NWM3 386 aaPredicted RBP15.4■□□□□ 0.06
HMGA2-210ENST00000541363 COX4I1P13073 169 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 HTR1BP28222 390 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 SCN1BQ07699 218 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 SLC9A4Q6AI14 798 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 AFTPHQ6ULP2 937 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 NYAP2Q9P242 653 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 TRPS1Q9UHF7 1281 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 C2orf71A6NGG8 1288 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 CTSKP43235 329 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 ROR2Q01974 943 aaKnown RBP15.4■□□□□ 0.06
HMGA2-210ENST00000541363 SP140Q13342 867 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 ASB8Q9H765 288 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 PRDM16Q9HAZ2 1276 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 PSMD9O00233 223 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 NR4A1P22736 598 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 RBM34P42696 430 aaKnown RBP15.4■□□□□ 0.06
HMGA2-210ENST00000541363 RAB27AP51159 221 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 GTF2A2P52657 109 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 RPL38P63173 70 aaKnown RBP15.4■□□□□ 0.06
HMGA2-210ENST00000541363 ST3GAL1Q11201 340 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 OR2L8Q8NGY9 312 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 OR52E6Q96RD3 313 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 PRKAB1Q9Y478 270 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 H0Y858 1186 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 FFAR3O14843 346 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 GPR42O15529 346 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 ANPEPP15144 967 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 DPYSQ14117 519 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 TCEAL3Q969E4 200 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 NXPE2Q96DL1 559 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 TCF12Q99081 682 aa15.4■□□□□ 0.06
HMGA2-210ENST00000541363 OTCP00480 354 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 HSPA14Q0VDF9 509 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 MFSD10Q14728 455 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 GPRIN3Q6ZVF9 776 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 TMC3Q7Z5M5 1100 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 ERLEC1Q96DZ1 483 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 TRNAU1APQ9NX07 287 aaKnown RBP15.39■□□□□ 0.05
HMGA2-210ENST00000541363 GMFGO60234 142 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 MAFKO60675 156 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 KDM4BO94953 1096 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 IDO1P14902 403 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 CRTC3Q6UUV7 619 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 GFM1Q96RP9 751 aaKnown RBP15.39■□□□□ 0.05
HMGA2-210ENST00000541363 EIF3KQ9UBQ5 218 aaKnown RBP15.39■□□□□ 0.05
HMGA2-210ENST00000541363 PPP1R3GB7ZBB8 358 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 FAM86B2P0C5J1 330 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 SSTR1P30872 391 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 CASP9P55211 416 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 PRAMEF17Q5VTA0 474 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 DHDDSQ86SQ9 333 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 RIOK2Q9BVS4 552 aaKnown RBP15.39■□□□□ 0.05
HMGA2-210ENST00000541363 C1QTNF3-AMACRE9PGA6 284 aa15.39■□□□□ 0.05
HMGA2-210ENST00000541363 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
HMGA2-210ENST00000541363 SLC9A3R1O14745 358 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms