RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 CCNCP24863 283 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 RFTN1Q14699 578 aaPredicted RBP12.58□□□□□ -0.39
RNF4-222ENST00000541204 MGAT5BQ3V5L5 792 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 FAM219BQ5XKK7 198 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 PKN3Q6P5Z2 889 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 CNSTQ6PJW8 725 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 RPS27LQ71UM5 84 aaKnown RBP12.58□□□□□ -0.39
RNF4-222ENST00000541204 EME1Q96AY2 570 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 MRPL1Q9BYD6 325 aaKnown RBP12.58□□□□□ -0.39
RNF4-222ENST00000541204 POMKQ9H5K3 350 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 ATXN10Q9UBB4 475 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 IPO11Q9UI26 975 aaKnown RBP12.58□□□□□ -0.39
RNF4-222ENST00000541204 PCDHGA7Q9Y5G6 932 aa12.58□□□□□ -0.39
RNF4-222ENST00000541204 TRIM38O00635 465 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 MATN3O15232 486 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 CSPG5O95196 566 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 EOMESO95936 686 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 COL6A2P12110 1019 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 ETFBP38117 255 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 SLC1A2P43004 574 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 INHBCP55103 352 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 TBX4P57082 545 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 PSME3P61289 254 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 PABPC1LQ4VXU2 614 aaKnown RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 ALFQ53S48 1182 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 AMIGO2Q86SJ2 522 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 SNX31Q8N9S9 440 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 DBF4BQ8NFT6 615 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 CEP70Q8NHQ1 597 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 ELMO2Q96JJ3 720 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 MAELQ96JY0 434 aaKnown RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 CRISPLD1Q9H336 500 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 PLK2Q9NYY3 685 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 ARHGEF37A1IGU5 675 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 E7ENX8 843 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 OAZ2O95190 189 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 ZNF26P17031 533 aaPredicted RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 FGFR3P22607 806 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 ARNTP27540 789 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 TAS2R39P59534 338 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 C10orf120Q5SQS8 335 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 RAP1GAP2Q684P5 730 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 MON1AQ86VX9 555 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 EGFL6Q8IUX8 553 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 HMGCLL1Q8TB92 370 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 HEXDCQ8WVB3 486 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 FBXO32Q969P5 355 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 ASB9Q96DX5 294 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 MRPL46Q9H2W6 279 aaKnown RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 CYP4F12Q9HCS2 524 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 TRPC7Q9HCX4 862 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 NT5MQ9NPB1 228 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 EPS15L1Q9UBC2 864 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 AAR2Q9Y312 384 aaKnown RBP12.58□□□□□ -0.4
RNF4-222ENST00000541204 PCDHB5Q9Y5E4 795 aa12.58□□□□□ -0.4
RNF4-222ENST00000541204 C7orf72A4D263 438 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 TRPC5OSA6NMA1 111 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 GJB3O75712 270 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 CAPNS1P04632 268 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 CYP2C18P33260 490 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 ARCN1P48444 511 aaKnown RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 HSPA13P48723 471 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 MLLT6P55198 1093 aaPredicted RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 RALGDSQ12967 914 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 APOFQ13790 326 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 CYTH1Q15438 398 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 UGP2Q16851 508 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 MANEALQ5VSG8 457 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 RSPO2Q6UXX9 243 aaPredicted RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 LCA5Q86VQ0 697 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 RNF135Q8IUD6 432 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 SCML4Q8N228 414 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 PELI3Q8N2H9 469 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 RTL3Q8N8U3 475 aaKnown RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 LRTOMTQ8WZ04 291 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 HMCESQ96FZ2 354 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 TNFRSF12AQ9NP84 129 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 CCL22O00626 93 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 AURKAO14965 403 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 NPHS1O60500 1241 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 INHAP05111 366 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 HSPA1AP0DMV8 641 aaKnown RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 HSPA1BP0DMV9 641 aaKnown RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 PSMC3P17980 439 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 ZNF135P52742 658 aaPredicted RBP12.57□□□□□ -0.4
RNF4-222ENST00000541204 SULT2A1Q06520 285 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 TAF10Q12962 218 aa12.57□□□□□ -0.4
RNF4-222ENST00000541204 TRIM25Q14258 630 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms