RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	RHOT2	Q8IXI1	618 aa		13.7	□□□□□ -0.22
POLE-215	ENST00000540987	PELI3	Q8N2H9	469 aa		13.7	□□□□□ -0.22
POLE-215	ENST00000540987	PLD5	Q8N7P1	536 aa		13.7	□□□□□ -0.22
POLE-215	ENST00000540987	LRRC61	Q9BV99	259 aa		13.7	□□□□□ -0.22
POLE-215	ENST00000540987	DTL	Q9NZJ0	730 aa		13.7	□□□□□ -0.22
POLE-215	ENST00000540987	APOBEC3B	Q9UH17	382 aa	Known RBP	13.7	□□□□□ -0.22
POLE-215	ENST00000540987	CFAP69	A5D8W1	941 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-215	ENST00000540987		A8MX80	341 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	TOR1B	O14657	336 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	MATN3	O15232	486 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	AQP9	O43315	295 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	LZTS3	O60299	673 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-215	ENST00000540987	GCAT	O75600	419 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	PGLS	O95336	258 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	HLA-DQB2	P05538	268 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	C1S	P09871	688 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	LHCGR	P22888	699 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	ARHGAP25	P42331	645 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	DSC2	Q02487	901 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	MTM1	Q13496	603 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	INPP5A	Q14642	412 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	NFATC4	Q14934	902 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	IFI16	Q16666	785 aa	Known RBP	13.69	□□□□□ -0.22
POLE-215	ENST00000540987	ALG11	Q2TAA5	492 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	DEFB133	Q30KQ1	61 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	RALGPS1	Q5JS13	557 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	FAM182A	Q5T1J6	154 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	HES3	Q5TGS1	186 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	GAS2L3	Q86XJ1	694 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	LRRC49	Q8IUZ0	686 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	MAP7D3	Q8IWC1	876 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	BBS5	Q8N3I7	341 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	GALNT15	Q8N3T1	639 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	PAF1	Q8N7H5	531 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	LMX1A	Q8TE12	382 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.69	□□□□□ -0.22
POLE-215	ENST00000540987	NSMCE1	Q8WV22	266 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	APOLD1	Q96LR9	279 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	COQ10A	Q96MF6	247 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	TSGA13	Q96PP4	275 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	RNF157	Q96PX1	679 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	SMIM14	Q96QK8	99 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	SEMA3C	Q99985	751 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	GOLPH3	Q9H4A6	298 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	INTU	Q9ULD6	942 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	TFR2	Q9UP52	801 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	OR1A2	Q9Y585	309 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987	GOLGA4	Q13439	2230 aa	Known RBP	13.69	□□□□□ -0.22
POLE-215	ENST00000540987	PKD1L2	Q7Z442	2459 aa		13.69	□□□□□ -0.22
POLE-215	ENST00000540987		A0A0U1RQS6	177 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	ZNF487	B1APH4	448 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	TAF4	O00268	1085 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	FZD6	O60353	706 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	HEXIM1	O94992	359 aa	Known RBP	13.68	□□□□□ -0.22
POLE-215	ENST00000540987	LCA5L	O95447	670 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	PDHA1	P08559	390 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	ALPPL2	P10696	532 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	CKMT1A	P12532	417 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	VIPR1	P32241	457 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	DAB2	P98082	770 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	NIPAL4	Q0D2K0	466 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	ILK	Q13418	452 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	C1orf61	Q13536	156 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	PTK2B	Q14289	1009 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	ZFYVE27	Q5T4F4	411 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	SLC9A4	Q6AI14	798 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	NPNT	Q6UXI9	565 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	TSPAN33	Q86UF1	283 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	TMPRSS12	Q86WS5	348 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	FAM181A	Q8N9Y4	354 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	ARRDC2	Q8TBH0	407 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	MDM1	Q8TC05	714 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	PIH1D2	Q8WWB5	315 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	FATE1	Q969F0	183 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	FUBP1	Q96AE4	644 aa	Known RBP	13.68	□□□□□ -0.22
POLE-215	ENST00000540987	HDAC11	Q96DB2	347 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	PDXP	Q96GD0	296 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-215	ENST00000540987	APOO	Q9BUR5	198 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	POLR1E	Q9GZS1	481 aa	Known RBP	13.68	□□□□□ -0.22
POLE-215	ENST00000540987	CLPB	Q9H078	707 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	RAI2	Q9Y5P3	530 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	CSNK1G3	Q9Y6M4	447 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	MYLK	Q15746	1914 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	APC2	O95996	2303 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	ZZEF1	O43149	2961 aa		13.68	□□□□□ -0.22
POLE-215	ENST00000540987	WDFY3	Q8IZQ1	3526 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	ALPI	P09923	528 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	CTPS1	P17812	591 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	COMT	P21964	271 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	FECH	P22830	423 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	CCNC	P24863	283 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	PEX5	P50542	639 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	HADHB	P55084	474 aa	Known RBP	13.67	□□□□□ -0.22
POLE-215	ENST00000540987	KIAA1024L	P59773	190 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	POLR2L	P62875	67 aa	Known RBP	13.67	□□□□□ -0.22
POLE-215	ENST00000540987	INSM1	Q01101	510 aa	Predicted RBP	13.67	□□□□□ -0.22
POLE-215	ENST00000540987	ZBTB17	Q13105	803 aa		13.67	□□□□□ -0.22
POLE-215	ENST00000540987	ACOX1	Q15067	660 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms