RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 IGFLR1Q9H665 355 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 PHTF1Q9UMS5 762 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 FAM95CA0A1B0GW59 222 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 SLC7A4O43246 635 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 TIMM44O43615 452 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 PROCP04070 461 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 CYBBP04839 570 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 ALPIP09923 528 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 PAMP19021 973 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 TAS2R39P59534 338 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 GKAP1Q5VSY0 366 aaPredicted RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 ZCCHC23Q6ZST2 131 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 C12orf40Q86WS4 652 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 NPAS3Q8IXF0 933 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 SPATA6LQ8N4H0 392 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 PIH1D2Q8WWB5 315 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 FAM167BQ9BTA0 163 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 UNKQ9C0B0 810 aaKnown RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 IQCGQ9H095 443 aaKnown RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 MANSC1Q9H8J5 431 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 PCDHB9Q9Y5E1 797 aa12.32□□□□□ -0.44
AP003559.1-201ENST00000540906 COL4A3Q01955 1670 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 ANKRD66B4E2M5 251 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 EBAG9O00559 213 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 TRAFD1O14545 582 aaPredicted RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 ZNF197O14709 1029 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 GPR39O43194 453 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 GLRA3O75311 464 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 RPP40O75818 363 aaKnown RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 PAPLNO95428 1278 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 S1PR4O95977 384 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CYP17A1P05093 508 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 BPGMP07738 259 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 SLC35E2BP0CK96 405 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 PABPC1P11940 636 aaKnown RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 ARSAP15289 507 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 TCF3P15923 654 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CA5AP35218 305 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CD151P48509 253 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CDKN1CP49918 316 aaPredicted RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 SEMG2Q02383 582 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 OVGP1Q12889 678 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 USP10Q14694 798 aaKnown RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 PCLAFQ15004 111 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 RETSATQ6NUM9 610 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 TDHQ8IZJ6 230 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CACNA2D3Q8IZS8 1091 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CENPLQ8N0S6 344 aaPredicted RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 GPATCH11Q8N954 259 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 ACDQ96AP0 544 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 ELMO2Q96JJ3 720 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 OMDQ99983 421 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 PITPNM3Q9BZ71 974 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 BPIFA1Q9NP55 256 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 NLE1Q9NVX2 485 aaPredicted RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 SIRPGQ9P1W8 387 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 SZT2Q5T011 3432 aa12.31□□□□□ -0.44
AP003559.1-201ENST00000540906 OTOL1A6NHN0 477 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 PGLSO95336 258 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 SBK3P0C264 359 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 KCNA4P22459 653 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ALDH3A1P30838 453 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ARRB2P32121 409 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 PRAMEP78395 509 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 IFT88Q13099 833 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 DHCR24Q15392 516 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 C22orf39Q6P5X5 142 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ZNF549Q6P9A3 640 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 GLT6D1Q7Z4J2 308 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 TMEM151AQ8N4L1 468 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 OTUD6BQ8N6M0 293 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CHST14Q8NCH0 376 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 KCTD4Q8WVF5 259 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 MYO19Q96H55 970 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 RMDN2Q96LZ7 410 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 NSRP1Q9H0G5 558 aaKnown RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 MTG2Q9H4K7 406 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 FAM96AQ9H5X1 160 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 NSMCE4AQ9NXX6 385 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 C5orf42Q9H799 3197 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 SCN8AQ9UQD0 1980 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
AP003559.1-201ENST00000540906 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms