RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TCEAL8	Q8IYN2	117 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATAD1	Q8NBU5	361 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FNDC8	Q8TC99	324 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SP7	Q8TDD2	431 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LRTOMT	Q8WZ04	291 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC29A1	Q99808	456 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMEM79	Q9BSE2	394 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TASP1	Q9H6P5	420 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TIMMDC1	Q9NPL8	285 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EBF1	Q9UH73	591 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		F5H5T6	163 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRM6	O15303	877 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	USP12	O75317	370 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	JUN	P05412	331 aa	Known RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HAPLN1	P10915	354 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CKMT2	P17540	419 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GLRB	P48167	497 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	APOF	Q13790	326 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	STARD3	Q14849	445 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PDGFRL	Q15198	375 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LSM12	Q3MHD2	195 aa	Known RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KRT80	Q6KB66	452 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EPGN	Q6UW88	154 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LCLAT1	Q6UWP7	414 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LAYN	Q6UX15	382 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ACVR1C	Q8NER5	493 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CIB1	Q99828	191 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPR62	Q9BZJ7	368 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDH19	Q9H159	772 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZBP1	Q9H171	429 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CATSPERB	Q9H7T0	1116 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	WDR41	Q9HAD4	459 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	WDR6	Q9NNW5	1121 aa	Known RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RNF19A	Q9NV58	838 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MOCS1	Q9NZB8	636 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GMPR2	Q9P2T1	348 aa	Known RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SH3GLB1	Q9Y371	365 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SNX13	Q9Y5W8	968 aa		5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	COL11A1	P12107	1806 aa	Predicted RBP	5.71	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MYO18A	Q92614	2054 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC38A8	A6NNN8	435 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CNP	P09543	421 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPD1	P21695	349 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC5A3	P53794	718 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDK18	Q07002	472 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RALGDS	Q12967	914 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SMAD4	Q13485	552 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MTX3	Q5HYI7	312 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C1QTNF12	Q5T7M4	302 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RNF168	Q8IYW5	571 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SPATA6L	Q8N4H0	392 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C12orf29	Q8N999	325 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	VN1R2	Q8NFZ6	395 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM110B	Q8TC76	370 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DDI1	Q8WTU0	396 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PDCD6IP	Q8WUM4	868 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AGAP3	Q96P47	875 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AGAP2	Q99490	1192 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LGMN	Q99538	433 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SERPINI1	Q99574	410 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MRPL45	Q9BRJ2	306 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	APOL5	Q9BWW9	433 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PAIP1	Q9H074	479 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PCDH18	Q9HCL0	1135 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	INIP	Q9NRY2	104 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MKS1	Q9NXB0	559 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MIOS	Q9NXC5	875 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MARCH2	Q9P0N8	246 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DCDC2	Q9UHG0	476 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PCDHGC3	Q9UN70	934 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC27A5	Q9Y2P5	690 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MTMR11	A4FU01	709 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RGSL1	A5PLK6	1076 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	COL6A2	P12110	1019 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRK2	P25098	689 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCR1	P32246	355 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TBX4	P57082	545 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EFEMP1	Q12805	493 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DUSP6	Q16828	381 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DCAF6	Q58WW2	860 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	XKR5	Q6UX68	686 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM183BP	Q6ZVS7	135 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRMT11	Q7Z4G4	463 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DCLK2	Q8N568	766 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ADCY4	Q8NFM4	1077 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LINC01599	Q8WXQ3	324 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IRF7	Q92985	503 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPWD1	Q96BP3	646 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SNRNP25	Q9BV90	132 aa	Known RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	YIPF2	Q9BWQ6	316 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GATA5	Q9BWX5	397 aa	Predicted RBP	5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	XYLT2	Q9H1B5	865 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LHX5	Q9H2C1	402 aa		5.7	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DYRK4	Q9NR20	520 aa		5.7	□□□□□ -1.5

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