RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 BCAT2O15382 392 aaPredicted RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 TSPAN3O60637 253 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 NDUFS7O75251 213 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 TCEA3O75764 348 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 LINC00271P0C7V0 271 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 G6PDP11413 515 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 CETPP11597 493 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 HNRNPH1P31943 449 aaKnown RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 PGM1P36871 562 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 IL15P40933 162 aaPredicted RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 HILS1P60008 231 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 PHEXP78562 749 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 TAF11Q15544 211 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 OASLQ15646 514 aaKnown RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 EFNB3Q15768 340 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 ATP13A5Q4VNC0 1218 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 ZNF667Q5HYK9 610 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 SERTAD4-AS1Q5TG53 156 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 TADA2BQ86TJ2 420 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 SLC9B2Q86UD5 537 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 NOXA1Q86UR1 476 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 DCUN1D3Q8IWE4 304 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 ZCCHC9Q8N567 271 aaKnown RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 USP38Q8NB14 1042 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 KCNH5Q8NCM2 988 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 ZSCAN31Q96LW9 406 aaPredicted RBP3.67□□□□□ -1.82
MDM2-227ENST00000540709 UBTD1Q9HAC8 227 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 CNGB3Q9NQW8 809 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.67□□□□□ -1.82
MDM2-227ENST00000540709 CARD8Q9Y2G2 431 aa3.67□□□□□ -1.82
MDM2-227ENST00000540709 A0A0U1RQF3 1178 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 CPED1A4D0V7 1026 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 ERVV-2B6SEH9 535 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 C16orf97H3BN30 126 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 ETFAP13804 333 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 EIF2S3P41091 472 aaKnown RBP3.66□□□□□ -1.82
MDM2-227ENST00000540709 PPP2R5BQ15173 497 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 FBXO47Q5MNV8 452 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 WDR45BQ5MNZ6 344 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 ATG16L1Q676U5 607 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 ZNF449Q6P9G9 518 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 SLC36A4Q6YBV0 504 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 CCNI2Q6ZMN8 369 aaPredicted RBP3.66□□□□□ -1.82
MDM2-227ENST00000540709 KRBA2Q6ZNG9 492 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 SLC26A9Q7LBE3 791 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 TDRPQ86YL5 185 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 KBTBD3Q8NAB2 608 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 SCCPDHQ8NBX0 429 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 NOC3LQ8WTT2 800 aaKnown RBP3.66□□□□□ -1.82
MDM2-227ENST00000540709 UHRF2Q96PU4 802 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 TWNKQ96RR1 684 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 HEMGNQ9BXL5 484 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 POU2F3Q9UKI9 436 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 FAM96BQ9Y3D0 163 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 NFE2L3Q9Y4A8 694 aa3.66□□□□□ -1.82
MDM2-227ENST00000540709 MID1O15344 667 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 KLK8O60259 260 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 PEX14O75381 377 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 SRCP12931 536 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 CD58P19256 250 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 GPTP24298 496 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 FUT6P51993 359 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 CDH15P55291 814 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 EFNB1P98172 346 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 TROAPQ12815 778 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 ILF3Q12906 894 aaKnown RBP eCLIP3.65□□□□□ -1.835e-8■□□□□ 10.9
MDM2-227ENST00000540709 GRIK3Q13003 919 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 DMP1Q13316 513 aaPredicted RBP3.65□□□□□ -1.83
MDM2-227ENST00000540709 CTF1Q16619 201 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 GRAMD1BQ3KR37 738 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 RGMBQ6NW40 437 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 CPLX2Q6PUV4 134 aaKnown RBP3.65□□□□□ -1.83
MDM2-227ENST00000540709 SATL1Q86VE3 508 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 ODF3L1Q8IXM7 274 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 TNIP2Q8NFZ5 429 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 PPCSQ9HAB8 311 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 BPIFA1Q9NP55 256 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 RIC8AQ9NPQ8 531 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 KIAA1456Q9P272 454 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 HSF4Q9ULV5 492 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 ZNF711Q9Y462 761 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 PCDHGB3Q9Y5G1 929 aa3.65□□□□□ -1.83
MDM2-227ENST00000540709 PLRG1O43660 514 aaKnown RBP3.64□□□□□ -1.83
MDM2-227ENST00000540709 FGF17O60258 216 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 GALTP07902 379 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 GNL1P36915 607 aaPredicted RBP3.64□□□□□ -1.83
MDM2-227ENST00000540709 ECT2LQ008S8 904 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 SLC20A2Q08357 652 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 TAF12Q16514 161 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 SYT16Q17RD7 645 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 EIF2S3LQ2VIR3 472 aaKnown RBP3.64□□□□□ -1.83
MDM2-227ENST00000540709 GPATCH4Q5T3I0 446 aaKnown RBP3.64□□□□□ -1.83
MDM2-227ENST00000540709 FBXO46Q6PJ61 603 aaPredicted RBP3.64□□□□□ -1.83
MDM2-227ENST00000540709 FOXL2NBQ6ZUU3 175 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 PLD5Q8N7P1 536 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 LSM14AQ8ND56 463 aaKnown RBP3.64□□□□□ -1.83
MDM2-227ENST00000540709 AGBL3Q8NEM8 1001 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 DMBX1Q8NFW5 382 aa3.64□□□□□ -1.83
MDM2-227ENST00000540709 BBS10Q8TAM1 723 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms