RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ADRA1AP35348 466 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 SLC7A2P52569 658 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 VPS26BQ4G0F5 336 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 TECRLQ5HYJ1 363 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 OGFRL1Q5TC84 451 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 REP15Q6BDI9 236 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 NUDT8Q8WV74 236 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 SEMA3CQ99985 751 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 SENP6Q9GZR1 1112 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 UTP6Q9NYH9 597 aaKnown RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 RIMS3Q9UJD0 308 aa13.72□□□□□ -0.21
BNIP3-202ENST00000540159 HEMK1Q9Y5R4 338 aaPredicted RBP13.72□□□□□ -0.21
BNIP3-202ENST00000540159 NYNRINQ9P2P1 1898 aaKnown RBP13.71□□□□□ -0.21
BNIP3-202ENST00000540159 SAC3D1A6NKF1 404 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 ROR2Q01974 943 aaKnown RBP13.71□□□□□ -0.21
BNIP3-202ENST00000540159 SIRPB2Q5JXA9 342 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 AP1ARQ63HQ0 302 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 FAM171BQ6P995 826 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 RTL3Q8N8U3 475 aaKnown RBP13.71□□□□□ -0.21
BNIP3-202ENST00000540159 ZNF512Q96ME7 567 aaPredicted RBP13.71□□□□□ -0.21
BNIP3-202ENST00000540159 SPON2Q9BUD6 331 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 SEMA4BQ9NPR2 832 aaPredicted RBP13.71□□□□□ -0.21
BNIP3-202ENST00000540159 VWA7Q9Y334 891 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 PCDHGA7Q9Y5G6 932 aa13.71□□□□□ -0.21
BNIP3-202ENST00000540159 MUSKO15146 869 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 CLPTM1O96005 669 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.22
BNIP3-202ENST00000540159 LINC00032P0C843 101 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 GRIA3P42263 894 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 APLP1P51693 650 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.22
BNIP3-202ENST00000540159 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 AGAP9Q5VTM2 703 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 POTEHQ6S545 545 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 THEM5Q8N1Q8 247 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 PGBD5Q8N414 524 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 METTL25Q8N6Q8 603 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 TRPC4APQ8TEL6 797 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 TRAPPC9Q96Q05 1148 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 SEPT5Q99719 369 aaPredicted RBP13.71□□□□□ -0.22
BNIP3-202ENST00000540159 SH3GL3Q99963 347 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 COQ10BQ9H8M1 238 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 LIN28AQ9H9Z2 209 aaKnown RBP13.71□□□□□ -0.22
BNIP3-202ENST00000540159 SARS2Q9NP81 518 aaKnown RBP13.71□□□□□ -0.22
BNIP3-202ENST00000540159 TRAF6Q9Y4K3 522 aa13.71□□□□□ -0.22
BNIP3-202ENST00000540159 A0A0D9SEW6 157 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 PDLIM1O00151 329 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MRASO14807 208 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 H2AFYO75367 372 aaKnown RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MYBPC1Q00872 1141 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 SEMA3AQ14563 771 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 SLC5A9Q2M3M2 681 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 FUT11Q495W5 492 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 ADGRG6Q86SQ4 1221 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 PTGR2Q8N8N7 351 aaPredicted RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 GIPC2Q8TF65 315 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MID1IP1Q9NPA3 183 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CLIC3O95833 236 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 ASGR1P07306 291 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 GFAPP14136 432 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 PSMC3P17980 439 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CDKN1CP49918 316 aaPredicted RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 TBX4P57082 545 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 GRB7Q14451 532 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 NADK2Q4G0N4 442 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 FBXL22Q6P050 247 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 KLC3Q6P597 504 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CILP2Q8IUL8 1156 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MPP4Q96JB8 637 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CNDP1Q96KN2 507 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 PRPF19Q9UMS4 504 aaKnown RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 GABRQQ9UN88 632 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 C7orf72A4D263 438 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 AKAP10O43572 662 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MYCP01106 439 aaPredicted RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 ALDOCP09972 364 aaKnown RBP13.7□□□□□ -0.22
BNIP3-202ENST00000540159 AKR1A1P14550 325 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 PRDX6P30041 224 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 OR1E1P30953 314 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 CDH15P55291 814 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 SH3BP2P78314 561 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 NUP93Q8N1F7 819 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 RDH11Q8TC12 318 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 BPIFA1Q9NP55 256 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 GIT1Q9Y2X7 761 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 RAD54BQ9Y620 910 aa13.7□□□□□ -0.22
BNIP3-202ENST00000540159 MIA3Q5JRA6 1907 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 HEATR9A2RTY3 570 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 H3BMM5 538 aa13.69□□□□□ -0.22
BNIP3-202ENST00000540159 GPR182O15218 404 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms