RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SLC43A3Q8NBI5 491 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 CD99L2Q8TCZ2 262 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 BLOC1S5Q8TDH9 187 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 JADE3Q92613 823 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 C1orf74Q96LT6 269 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 RPRD1AQ96P16 312 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 GPR62Q9BZJ7 368 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 COPS7BQ9H9Q2 264 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 VTI1BQ9UEU0 232 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 GIMAP2Q9UG22 337 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 PCDHGB4Q9UN71 923 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 PCDHGB5Q9Y5G0 923 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 PTGDR2Q9Y5Y4 395 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 SLC12A8A0AV02 714 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 CCDC189A1A4V9 331 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 TADA2AO75478 443 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 LTA4HP09960 611 aaKnown RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 YWHAQP27348 245 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 CDH13P55290 713 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 NME5P56597 212 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 PRAMEP78395 509 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 HNRNPDQ14103 355 aaKnown RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 MRPL58Q14197 206 aaKnown RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 SEMA3AQ14563 771 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 GPNMBQ14956 572 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 FAM83EQ2M2I3 478 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 PIGGQ5H8A4 983 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 RSPO2Q6UXX9 243 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 ADGRG6Q86SQ4 1221 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 CUZD1Q86UP6 607 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 CILP2Q8IUL8 1156 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 SPPL2BQ8TCT7 592 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 PPP2R3CQ969Q6 453 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 SEMA3CQ99985 751 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 FBXO44Q9H4M3 255 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 FBRSL1Q9HCM7 1045 aaKnown RBP11.57□□□□□ -0.56
C11orf54-214ENST00000540113 TRPC7Q9HCX4 862 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 MARCH5Q9NX47 278 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
C11orf54-214ENST00000540113 FAM92AA1XBS5 289 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 NT5C1B-RDH14C9J2C7 533 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 SYN3O14994 580 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 NPHS1O60500 1241 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 RHOQP17081 205 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 MAGEA11P43364 429 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 ALDH1A3P47895 512 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 LEPRP48357 1165 aaKnown RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PFKPQ01813 784 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 TAF10Q12962 218 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 TCTN1Q2MV58 587 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 LHX8Q68G74 356 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 CCDC117Q8IWD4 279 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 OR9I1Q8NGQ6 314 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 OR13C4Q8NGS5 318 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 ARRDC2Q8TBH0 407 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 GIPC2Q8TF65 315 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 FBXO32Q969P5 355 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 IFT43Q96FT9 208 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 SLC45A3Q96JT2 553 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 DNAJC1Q96KC8 554 aaKnown RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 FAM193BQ96PV7 902 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 CCDC28BQ9BUN5 200 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PRKD2Q9BZL6 878 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PCDHAC1Q9H158 963 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 CCSER2Q9H7U1 834 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 ATP13A1Q9HD20 1204 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 ADA2Q9NZK5 511 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 VWA7Q9Y334 891 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 NBNO60934 754 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 IPO13O94829 963 aaKnown RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 SUPT7LO94864 414 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 S1PR4O95977 384 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 ATXN1LP0C7T5 689 aaKnown RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 KCNQ1P51787 676 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PRKAA2P54646 552 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 RALGDSQ12967 914 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 POLD3Q15054 466 aaPredicted RBP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 MMEL1Q495T6 779 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 AGAP9Q5VTM2 703 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 LILRA2Q8N149 483 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PXYLP1Q8TE99 480 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 PTERQ96BW5 349 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 KLHL32Q96NJ5 620 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.56□□□□□ -0.56
C11orf54-214ENST00000540113 TMEM248Q9NWD8 314 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 ASB3Q9Y575 518 aa11.56□□□□□ -0.56
C11orf54-214ENST00000540113 IGLV3-10A0A075B6K4 115 aa11.55□□□□□ -0.56
C11orf54-214ENST00000540113 A0A0D9SEW6 157 aa11.55□□□□□ -0.56
C11orf54-214ENST00000540113 A0A0U1RQS6 177 aa11.55□□□□□ -0.56
C11orf54-214ENST00000540113 C9JVG2 144 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms