RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TRAPPC5Q8IUR0 188 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 PRRG3Q9BZD7 231 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 SIX2Q9NPC8 291 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 DZANK1Q9NVP4 752 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 CSH1P0DML2 217 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 CSH2P0DML3 217 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 ALPPL2P10696 532 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 HPCAL1P37235 193 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 GRSF1Q12849 480 aaKnown RBP eCLIP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 PSMD5Q16401 504 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 LPCAT4Q643R3 524 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 SPESP1Q6UW49 350 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 C1orf127Q8N9H9 656 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 ZNF384Q8TF68 577 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 NKD2Q969F2 451 aaPredicted RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 PTCD3Q96EY7 689 aaKnown RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 C2orf49Q9BVC5 232 aaPredicted RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 ZCCHC2Q9C0B9 1178 aaKnown RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 REXO4Q9GZR2 422 aaKnown RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 RAD18Q9NS91 495 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 FAM208AQ9UK61 1670 aaKnown RBP14.59□□□□□ -0.07
CACNB1-206ENST00000539338 TMEM265A0A087WTH1 108 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 DYRK3O43781 588 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 MLYCDO95822 493 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 TTPAP49638 278 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 ZNF605Q86T29 641 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 CPNE8Q86YQ8 564 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 GPR88Q9GZN0 384 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 STMN3Q9NZ72 180 aa14.59□□□□□ -0.07
CACNB1-206ENST00000539338 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.07
CACNB1-206ENST00000539338 AZIN1O14977 448 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 PAGE1O75459 146 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 CREB1P16220 341 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 CTPS1P17812 591 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 CRHR1P34998 444 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 CRATP43155 626 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 IDH2P48735 452 aaKnown RBP14.58□□□□□ -0.07
CACNB1-206ENST00000539338 SEMA5AQ13591 1074 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 STRADAQ7RTN6 431 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 FGD2Q7Z6J4 655 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 TOP6BLQ8N6T0 577 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 C19orf18Q8NEA5 215 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 ELMO1Q92556 727 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 ABCG8Q9H221 673 aa14.58□□□□□ -0.07
CACNB1-206ENST00000539338 ALOX12P18054 663 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 ADRA1BP35368 520 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 POM121L1PQ3SYA9 428 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 SETMARQ53H47 684 aaPredicted RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 GPRIN3Q6ZVF9 776 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 TFAP2BQ92481 460 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 GNPTGQ9UJJ9 305 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 EFR3BQ9Y2G0 817 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 VWA7Q9Y334 891 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 CACNA1FO60840 1977 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 NFAT5O94916 1531 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 CD3EAPO15446 510 aaKnown RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 ULK1O75385 1050 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 RECQL5O94762 991 aaPredicted RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 ETS2P15036 469 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 HPGDP15428 266 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 FEN1P39748 380 aaKnown RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 SLC7A2P52569 658 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 CDK18Q07002 472 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 SMARCB1Q12824 385 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 BNIP1Q12981 228 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 DGUOKQ16854 277 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 RNASEH2BQ5TBB1 312 aaKnown RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 PDE12Q6L8Q7 609 aaKnown RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 SLC24A5Q71RS6 500 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 CYP4Z2PQ8N1L4 340 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 EMID1Q96A84 441 aaPredicted RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 MAML3Q96JK9 1138 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 ZNHIT2Q9UHR6 403 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 AP4B1Q9Y6B7 739 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 CNTNAP1P78357 1384 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 MMP3P08254 477 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 HTRA3P83110 453 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 PMF1Q6P1K2 205 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 EPHX4Q8IUS5 362 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 RBM15BQ8NDT2 890 aaKnown RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 REPS1Q96D71 796 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 TEKT5Q96M29 485 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 BBS4Q96RK4 519 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 RHOJQ9H4E5 214 aa14.58□□□□□ -0.08
CACNB1-206ENST00000539338 APOBEC3GQ9HC16 384 aaKnown RBP14.58□□□□□ -0.08
CACNB1-206ENST00000539338 H3BMM5 538 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TBL1XO60907 577 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TSC22D2O75157 780 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 MED26O95402 600 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 POLD2P49005 469 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 PSMD7P51665 324 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 POLR2LP62875 67 aaKnown RBP14.57□□□□□ -0.08
CACNB1-206ENST00000539338 TGM3Q08188 693 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 GK5Q6ZS86 529 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 HPS6Q86YV9 775 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 GRHL1Q9NZI5 618 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 SMIM28A0A1B0GU29 152 aa14.57□□□□□ -0.08
CACNB1-206ENST00000539338 C1QTNF3-AMACRE9PGA6 284 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms