RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 NEFHP12036 1026 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 POLR2EP19388 210 aaKnown RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 FOXN2P32314 431 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 NNMTP40261 264 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 ZNF140P52738 457 aaPredicted RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 CTBP1Q13363 440 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 USP10Q14694 798 aaKnown RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 DHCR24Q15392 516 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 RARS2Q5T160 578 aaKnown RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 ATXN7L2Q5T6C5 722 aaPredicted RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 C22orf39Q6P5X5 142 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 AFTPHQ6ULP2 937 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 CILP2Q8IUL8 1156 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 DENND6AQ8IWF6 608 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 OTUD6BQ8N6M0 293 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 EFHBQ8N7U6 833 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 PDCD6IPQ8WUM4 868 aaKnown RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 ZNF75CPQ92670 426 aaPredicted RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 TSPAN17Q96FV3 270 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 NSMCE3Q96MG7 304 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 ASB16Q96NS5 453 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 TM6SF2Q9BZW4 377 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 MANSC1Q9H8J5 431 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 THG1LQ9NWX6 298 aaKnown RBP20.4■□□□□ 0.86
CDH5-202ENST00000539168 VPS9D1Q9Y2B5 631 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 ARL5AQ9Y689 179 aa20.4■□□□□ 0.86
CDH5-202ENST00000539168 A0A096LPK6 155 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 K7ERQ8 282 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 SMAD6O43541 496 aaKnown RBP20.39■□□□□ 0.86
CDH5-202ENST00000539168 PDHA1P08559 390 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 SLC12A2P55011 1212 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 SMAD1Q15797 465 aaKnown RBP20.39■□□□□ 0.86
CDH5-202ENST00000539168 ATG16L1Q676U5 607 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 CDHR3Q6ZTQ4 885 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 CCDC197Q8NCU1 140 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 OR4L1Q8NH43 312 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 TIFAQ96CG3 184 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 CDKN2AIPNLQ96HQ2 116 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 SEC16BQ96JE7 1060 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 DNAJC1Q96KC8 554 aaKnown RBP20.39■□□□□ 0.86
CDH5-202ENST00000539168 CPEB1Q9BZB8 566 aaKnown RBP20.39■□□□□ 0.86
CDH5-202ENST00000539168 SLC39A10Q9ULF5 831 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 STARD13Q9Y3M8 1113 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 PCDHB9Q9Y5E1 797 aa20.39■□□□□ 0.86
CDH5-202ENST00000539168 FAM95CA0A1B0GW59 222 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 C2P06681 752 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 ADH5P11766 374 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 STMN1P16949 149 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 KPNA2P52292 529 aaKnown RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 MPP1Q00013 466 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 ITIH4Q14624 930 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 PDGFRLQ15198 375 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 EML3Q32P44 896 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 PTAR1Q7Z6K3 402 aaPredicted RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 FGF13Q92913 245 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 ATXN7L3BQ96GX2 97 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 TBATAQ96M53 351 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 TCF12Q99081 682 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 CATSPERZQ9NTU4 200 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 FGFR1OP2Q9NVK5 253 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 EVLQ9UI08 416 aaPredicted RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 ANKRD36A6QL64 1941 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 CD3EAPO15446 510 aaKnown RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 POP4O95707 220 aaKnown RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 IL1BP01584 269 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 GABRB3P28472 473 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 RECQLP46063 649 aaPredicted RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 CSRP3P50461 194 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 RAB10P61026 200 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 MYLK3Q32MK0 819 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 CARD16Q5EG05 197 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 FAM78AQ5JUQ0 283 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 MBLAC2Q68D91 279 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 ANKRD54Q6NXT1 300 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 RAPH1Q70E73 1250 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 PAF1Q8N7H5 531 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 ARMC2Q8NEN0 867 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 SREK1Q8WXA9 508 aaKnown RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 ZNF641Q96N77 438 aaPredicted RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 IGFLR1Q9H665 355 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 INTS10Q9NVR2 710 aaKnown RBP20.38■□□□□ 0.85
CDH5-202ENST00000539168 SPO11Q9Y5K1 396 aa20.38■□□□□ 0.85
CDH5-202ENST00000539168 A0A087X1B8 175 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 EPOPA6NHQ4 379 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 H7C0S8 307 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 TRAFD1O14545 582 aaPredicted RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 STX7O15400 261 aaKnown RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 PLIN3O60664 434 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 GOT2P00505 430 aaKnown RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 CYP17A1P05093 508 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 ATP5BP06576 529 aaKnown RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 SRPRAP08240 638 aaKnown RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 ARSDP51689 593 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 FASTKD1Q53R41 847 aaKnown RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 DGKKQ5KSL6 1271 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 N4BP2L1Q5TBK1 243 aaPredicted RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 ASTLQ6HA08 431 aaPredicted RBP20.37■□□□□ 0.85
CDH5-202ENST00000539168 CLEC14AQ86T13 490 aa20.37■□□□□ 0.85
CDH5-202ENST00000539168 ADIPOR2Q86V24 386 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms