RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ERCC2P18074 760 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 NFKBIAP25963 317 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 MIPP30301 263 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PCK1P35558 622 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 RGRP47804 291 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 LIG3P49916 1009 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 POLR2LP62875 67 aaKnown RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 CXADRP78310 365 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 SKOR1P84550 965 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 RHDQ02161 417 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 BCL2L1Q07817 233 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 NSUN2Q08J23 767 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDB1-212ENST00000538470 RALGDSQ12967 914 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 EIF3IQ13347 325 aaKnown RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 C1orf61Q13536 156 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 DPYSQ14117 519 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CA9Q16790 459 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 TSR1Q2NL82 804 aaKnown RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 C3orf38Q5JPI3 329 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ENPP7Q6UWV6 458 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 DPPA4Q7L190 304 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 SRLQ86TD4 932 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CAMK1DQ8IU85 385 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 HID1Q8IV36 788 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ARL14Q8N4G2 192 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 NPWQ8N729 165 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 TSEN2Q8NCE0 465 aaKnown RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 WDR36Q8NI36 951 aaKnown RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ZNF653Q96CK0 615 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PDXPQ96GD0 296 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ATXN7L3BQ96GX2 97 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ZNF599Q96NL3 588 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PSKH2Q96QS6 385 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PEBP4Q96S96 227 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CCDC3Q9BQI4 270 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 SLC39A8Q9C0K1 460 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ZWILCHQ9H900 591 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 KCTD5Q9NXV2 234 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CNOT8Q9UFF9 292 aaKnown RBP8.7□□□□□ -1.02
DDB1-212ENST00000538470 SEPT3Q9UH03 358 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 PADI4Q9UM07 663 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 SATB2Q9UPW6 733 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 RAI2Q9Y5P3 530 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 CFAP46Q8IYW2 2715 aa8.7□□□□□ -1.02
DDB1-212ENST00000538470 ZNF462Q96JM2 2506 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 CDRT15L2A8MXV6 281 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 TMCO5BA8MYB1 307 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 D6RAR5 112 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 H3BRJ5 948 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 TMX2-CTNND1H3BSU7 103 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 DFFAO00273 331 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 PDE2AO00408 941 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 TRAFD1O14545 582 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 TNFRSF10CO14798 259 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 TEX33O43247 280 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 BUB1BO60566 1050 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 RECQL5O94762 991 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 TNFP01375 233 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 CELA2BP08218 269 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 ITGA2BP08514 1039 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 ITIH2P19823 946 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 ARL4AP40617 200 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 PDX1P52945 283 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 SRP54P61011 504 aaKnown RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 KLHL30Q0D2K2 578 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 C19orf57Q0VDD7 668 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 ZNF235Q14590 738 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 INPP5AQ14642 412 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 LBRQ14739 615 aaKnown RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 DPYSL2Q16555 572 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 ANO6Q4KMQ2 910 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 PPP6R3Q5H9R7 873 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 FIGNQ5HY92 759 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 RALGPS1Q5JS13 557 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 CRTC1Q6UUV9 634 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 LIPIQ6XZB0 460 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 CYP4V2Q6ZWL3 525 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 ZNF571Q7Z3V5 609 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 CLEC14AQ86T13 490 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 ZSWIM9Q86XI8 627 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 BBS5Q8N3I7 341 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 ARFGAP1Q8N6T3 406 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 KYQ8NBH2 561 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 NETO2Q8NC67 525 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 OR56A4Q8NGH8 313 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 SNRNP27Q8WVK2 155 aaKnown RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 TSACCQ96A04 125 aaPredicted RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 CCDC74AQ96AQ1 378 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 WBP1Q96G27 269 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 TMEM74Q96NL1 305 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 SLC46A1Q96NT5 459 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 GFM1Q96RP9 751 aaKnown RBP8.69□□□□□ -1.02
DDB1-212ENST00000538470 RBM15Q96T37 977 aaKnown RBP eCLIP8.69□□□□□ -1.02
DDB1-212ENST00000538470 STRADBQ9C0K7 418 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 HAUS4Q9H6D7 363 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 PCSK1NQ9UHG2 260 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 GPR34Q9UPC5 381 aa8.69□□□□□ -1.02
DDB1-212ENST00000538470 SSUH2Q9Y2M2 353 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms