RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 RIMKLBQ9ULI2 386 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ZFP37Q9Y6Q3 630 aaPredicted RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ANAPC1Q9H1A4 1944 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 A8MT66 165 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 TMEM233B4DJY2 109 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SLC22A2O15244 555 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 NVLO15381 856 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 COCHO43405 550 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 IPO13O94829 963 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 CXCL10P02778 98 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SERPINF2P08697 491 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 HMGA1P17096 107 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 PIK3R1P27986 724 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 OR1D2P34982 312 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SLC26A3P40879 764 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 CDH4P55283 916 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 RPS24P62847 133 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 GALNT3Q14435 633 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ACAP2Q15057 778 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ACAD11Q709F0 780 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 GPR150Q8NGU9 434 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 BLOC1S5Q8TDH9 187 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SH3RF2Q8TEC5 729 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ARHGAP26Q9UNA1 814 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 CDYLQ9Y232 598 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 MTF2Q9Y483 593 aaPredicted RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ANKRD36A6QL64 1941 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 GOT2P00505 430 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 KLKB1P03952 638 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 RBP1P09455 135 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 ACADSP16219 412 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SP100P23497 879 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 ADSLP30566 484 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SLC11A2P49281 568 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 TUFMP49411 452 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 TIAL1Q01085 375 aaKnown RBP eCLIP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CUL3Q13618 768 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 USP41Q3LFD5 358 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF549Q6P9A3 640 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 RNF135Q8IUD6 432 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 DEFB107AQ8IZN7 70 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 PDZD8Q8NEN9 1154 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SCG3Q8WXD2 468 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 DNAJC9Q8WXX5 260 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CCDC126Q96EE4 140 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF512Q96ME7 567 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 PSKH2Q96QS6 385 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CYP4F11Q9HBI6 524 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 COL4A6Q14031 1691 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 GBF1Q92538 1859 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CCDC162PA2VCL2 907 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 BUD23O43709 281 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 RPP40O75818 363 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SORBS2O94875 1100 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SEC24AO95486 1093 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 NDST3O95803 873 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CR2P20023 1033 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 FDXRP22570 491 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 PPARGP37231 505 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 RGRP47804 291 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SGSHP51688 502 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SULT2A1Q06520 285 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 LAMB3Q13751 1172 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SEMA3AQ14563 771 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 PDCD2Q16342 344 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 HECTD3Q5T447 861 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 TMEM198Q66K66 360 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 KLC3Q6P597 504 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 PIM3Q86V86 326 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 DENND1CQ8IV53 801 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 OR13C4Q8NGS5 318 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 YY1AP1Q9H869 796 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 CYP4F12Q9HCS2 524 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 SEPT3Q9UH03 358 aa14.06□□□□□ -0.16
LIMK1-208ENST00000538333 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 SDHDO14521 159 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 CD3EAPO15446 510 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 KDELR3O43731 214 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 STC2O76061 302 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 PDE5AO76074 875 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 GLP2RO95838 553 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 PIRTP0C851 137 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 THRAP10827 490 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 HNRNPLP14866 589 aaKnown RBP eCLIP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ANPEPP15144 967 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ABL2P42684 1182 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 KCNC1P48547 511 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ERFP50548 548 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 MUM1Q2TAK8 710 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 PPM1LQ5SGD2 360 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 GPR158Q5T848 1215 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 IL31Q6EBC2 164 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ISCA2Q86U28 154 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 PLD4Q96BZ4 506 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms