RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ZNF780BQ9Y6R6 833 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 COLEC10Q9Y6Z7 277 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 RASSF10A6NK89 507 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PEX11AO75192 247 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 LRATO95237 230 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 KCNH1O95259 989 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PABPC1P11940 636 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 IFI35P80217 286 aaPredicted RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 SRSF11Q05519 484 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 TMEM26Q6ZUK4 368 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SCUBE1Q8IWY4 988 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PROX1Q92786 737 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 VPS33AQ96AX1 596 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CAB39LQ9H9S4 337 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 GKN1Q9NS71 199 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 THAP1Q9NVV9 213 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 LIMD1Q9UGP4 676 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TMCO1Q9UM00 188 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 INVSQ9Y283 1065 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 SNED1Q8TER0 1413 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 GTPBP1O00178 669 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CDK14O94921 469 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 POP4O95707 220 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 PRKCGP05129 697 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PFKMP08237 780 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 HGFP14210 728 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CDH3P22223 829 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ATXN1P54253 815 aaKnown RBP5.38□□□□□ -1.55
LRP6-203ENST00000538239 COPZ1P61923 177 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 ZDHHC20Q5W0Z9 365 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 PAGE2Q7Z2X7 111 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 IRF2BP2Q7Z5L9 587 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TMPRSS11BQ86T26 416 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 CYP4Z2PQ8N1L4 340 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 STARD8Q92502 1023 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 TTLL2Q9BWV7 592 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 OSBPL6Q9BZF3 934 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 FZD8Q9H461 694 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 MAT2BQ9NZL9 334 aa5.38□□□□□ -1.55
LRP6-203ENST00000538239 LRP6O75581 1613 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TMEM191CA6NGB0 347 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SNTNA6NMZ2 147 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 IQCF5A8MTL0 148 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 RPP40O75818 363 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 C4BP0C0L5 1744 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 UQCRBP14927 111 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 RPL38P63173 70 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ARSIQ5FYB1 569 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TCHHL1Q5QJ38 904 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 C16orf62Q7Z3J2 963 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 DEFB107AQ8IZN7 70 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CDYL2Q8N8U2 506 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SCAIQ8N9R8 606 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SHDQ96IW2 340 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 POLR1BQ9H9Y6 1135 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 APOBEC3GQ9HC16 384 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ADPRHL2Q9NX46 363 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 HMGXB4Q9UGU5 601 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 COL1A1P02452 1464 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 HIST1H2ABP04908 130 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 IRAK1P51617 712 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 LPIN1Q14693 890 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TAF5Q15542 800 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CPSF6Q16630 551 aaKnown RBP eCLIP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ICE2Q659A1 982 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 HIST3H2AQ7L7L0 130 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 POLNQ7Z5Q5 900 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SRLQ86TD4 932 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 LDB1Q86U70 411 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZNF786Q8N393 782 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TFAP2BQ92481 460 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 HIST1H2ACQ93077 130 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 PSMG2Q969U7 264 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 LRRC39Q96DD0 335 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ASB2Q96Q27 587 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 MINDY3Q9H8M7 445 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ANKZF1Q9H8Y5 726 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SGK2Q9HBY8 427 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ELOVL2Q9NXB9 296 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CROTQ9UKG9 612 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SPEF2Q9C093 1822 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 FAM237AA0A1B0GTK4 181 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CCDC189A1A4V9 331 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 INSIG1O15503 277 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 LINC00032P0C843 101 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 UBTFL6P0CB48 400 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 HOXB8P17481 243 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 DAOAP59103 153 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CDK16Q00536 496 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 BIKQ13323 160 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ANGPT1Q15389 498 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 DLG2Q15700 870 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TXNDC8Q6A555 127 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 WDR93Q6P2C0 686 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 MMAAQ8IVH4 418 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZBTB2Q8N680 514 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CAVIN3Q969G5 261 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 AARSD1Q9BTE6 412 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 RAD21L1Q9H4I0 556 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms