RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 CORO1CQ9ULV4 474 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ARHGAP26Q9UNA1 814 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 CDYLQ9Y232 598 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 SSX2IPQ9Y2D8 614 aa11.47□□□□□ -0.57
SLC28A1-204ENST00000538177 ILVBLA1L0T0 632 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 RGSL1A5PLK6 1076 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 NEMP2A6NFY4 417 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 OR51F1A6NGY5 319 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 A8MT66 165 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 KDELR3O43731 214 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 FKTNO75072 461 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 CLDN11O75508 207 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 IPO13O94829 963 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 SEC24AO95486 1093 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 GLP2RO95838 553 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 GOT2P00505 430 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 KLKB1P03952 638 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 THRAP10827 490 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 RPL17P18621 184 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 KCNA5P22460 613 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 PIK3R1P27986 724 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 CDKN2DP55273 166 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 RPS24P62847 133 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 IL31Q6EBC2 164 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 FAM45BPQ6NSW5 357 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 TMEM207Q6UWW9 146 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 FAM45AQ8TCE6 357 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 DTX3LQ8TDB6 740 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 BLOC1S5Q8TDH9 187 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF333Q96JL9 665 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 MAELQ96JY0 434 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 PRICKLE1Q96MT3 831 aaPredicted RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 NACA2Q9H009 215 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 SUDS3Q9H7L9 328 aaPredicted RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 UBA2Q9UBT2 640 aaPredicted RBP11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 ARL5AQ9Y689 179 aa11.46□□□□□ -0.57
SLC28A1-204ENST00000538177 BRCA2P51587 3418 aa11.46□□□□□ -0.58
SLC28A1-204ENST00000538177 CCDC162PA2VCL2 907 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 NEMP1O14524 444 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 NVLO15381 856 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CD3EAPO15446 510 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 PQBP1O60828 265 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 FKBP6O75344 327 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 STC2O76061 302 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 PARNO95453 639 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 PENKP01210 267 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CR2P20023 1033 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ATP6V1C1P21283 382 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 FDXRP22570 491 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 PSMA3P25788 255 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 GALNT1Q10472 559 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CUL3Q13618 768 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 GALNT3Q14435 633 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 RFTN1Q14699 578 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 MRNIPQ6NTE8 343 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 AAGABQ6PD74 315 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 LRRC74BQ6ZQY2 392 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CHST9Q7L1S5 443 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 RNF135Q8IUD6 432 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 DENND1CQ8IV53 801 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SLC22A9Q8IVM8 553 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 DNAJC9Q8WXX5 260 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 IGSF21Q96ID5 467 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 FAR2Q96K12 515 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CLSTN3Q9BQT9 956 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 UNC93B1Q9H1C4 597 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CWH43Q9H720 699 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 NMRK1Q9NWW6 199 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 CDH22Q9UJ99 828 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ACTL7AQ9Y615 435 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 TRPC5OSA6NMA1 111 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ABLIM3O94929 683 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 JUNP05412 331 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ANPEPP15144 967 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ACADSP16219 412 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 OGNP20774 298 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SP100P23497 879 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 PPARGP37231 505 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SUOXP51687 545 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 OXCT1P55809 520 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SESN3P58005 492 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 TIAL1Q01085 375 aaKnown RBP eCLIP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SATB1Q01826 763 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 PTPRCAPQ14761 206 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 HERC3Q15034 1050 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ZNF549Q6P9A3 640 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SETD3Q86TU7 594 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 DEFB107AQ8IZN7 70 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 OR13C4Q8NGS5 318 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 RP9Q8TA86 221 aaKnown RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ZNF461Q8TAF7 563 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 NSMCE3Q96MG7 304 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SPON2Q9BUD6 331 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 HIPK3Q9H422 1215 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms